Zou Wenli, Sexton Thomas, Kraka Elfi, Freindorf Marek, Cremer Dieter
Computational and Theoretical Chemistry Group (CATCO), Department of Chemistry, Southern Methodist University , 3215 Daniel Ave, Dallas, Texas 75275-0314, United States.
J Chem Theory Comput. 2016 Feb 9;12(2):650-63. doi: 10.1021/acs.jctc.5b01098. Epub 2016 Jan 26.
The unified reaction valley approach (URVA) used for a detailed mechanistic analysis of chemical reactions is improved in three different ways: (i) Direction and curvature of path are analyzed in terms of internal coordinate components that no longer depend on local vibrational modes. In this way, the path analysis is no longer sensitive to path instabilities associated with the occurrences of imaginary frequencies. (ii) The use of third order terms of the energy for a local description of the reaction valley allows an extension of the URVA analysis into the pre- and postchemical regions of the reaction path, which are typically characterized by flat energy regions. (iii) Configurational and conformational processes of the reaction complex are made transparent even in cases where these imply energy changes far less than a kcal/mol by exploiting the topology of the potential energy surface. As examples, the rhodium-catalyzed methanol carbonization, the Diels-Alder reaction between 1,3-butadiene and ethene, and the rearrangement of HCN to CNH are discussed.
用于化学反应详细机理分析的统一反应谷方法(URVA)在三个不同方面得到了改进:(i)根据不再依赖于局部振动模式的内坐标分量来分析路径的方向和曲率。通过这种方式,路径分析不再对与虚频出现相关的路径不稳定性敏感。(ii)使用能量的三阶项对反应谷进行局部描述,使得URVA分析能够扩展到反应路径的化学前区和化学后区,这些区域通常以能量平坦区域为特征。(iii)通过利用势能面的拓扑结构,即使在反应复合物的构型和构象过程所涉及的能量变化远小于1千卡/摩尔的情况下,也能使其变得清晰明了。作为示例,讨论了铑催化的甲醇碳化反应、1,3 - 丁二烯与乙烯之间的狄尔斯 - 阿尔德反应以及HCN重排为CNH的反应。