School of Medicine (J.T., D.C.-G., C.-M.G., S.R., F.C., A.P.), Universidad El Bosque, Bogotá, Colombia; Department of Neurology (J.T., D.C.-G., C.D.-C., L.-E.B., C.-M.G., S.R., S.C.-R.), Hospital Universitario Fundación Santa Fe de Bogotá, Bogotá, Colombia; and School of Medicine (J.T., D.C.-G., C.D.-C., L.-E.B., S.R., D.M.N., H.G.d.R.) and Human Genetics Laboratory (D.C.-G., D.M.N., W.C., M.-C.L., H.G.d.R.), Department of Biological Sciences, Universidad de Los Andes, Bogotá, Colombia.
Neurol Neuroimmunol Neuroinflamm. 2015 Dec 24;3(1):e192. doi: 10.1212/NXI.0000000000000192. eCollection 2016 Feb.
The aim of this study was to determine ancestry informative markers, mitochondrial DNA haplogroups, and the association between HLA-DRB1 alleles and multiple sclerosis (MS) in a group of patients from Bogotá, Colombia.
In this case-control study, genomic DNA was isolated and purified from blood samples. HLA-DRB1 allele genotyping was done using PCR. Mitochondrial hypervariable region 1 was amplified and haplogroups were determined using HaploGrep software. Genomic ancestry was estimated by genotyping a panel of ancestry informative markers. To test the association of HLA polymorphisms and MS, we ran separate multivariate logistic regression models. Bonferroni correction was used to account for multiple regression tests.
A total of 100 patients with MS (mean age 40.4 ± 12 years; 70% females) and 200 healthy controls (mean age 37.6 ± 11 years; 83.5% females) were included in the analysis. Ancestry proportions and haplogroup frequencies did not differ between patients and controls. HLA-DRB115 was present in 31% of cases and 13.5% of controls, whereas HLA-DRB114 was present in 5% of cases and 15.5% of controls. In the multivariate model, HLA-DRB115 was significantly associated with MS (odds ratio [OR] = 3.05, p < 0.001), whereas HLA-DRB114 was confirmed as a protective factor in our population (OR = 0.16, p = 0.001).
This study provides evidence indicating that HLA-DRB115 allele confers susceptibility to MS and HLA-DRB114 allele exerts resistance to MS in a highly admixed population. This latter finding could partially explain the low prevalence of MS in Bogotá, Colombia.
本研究旨在确定哥伦比亚波哥大一组患者的祖源信息标记物、线粒体 DNA 单倍群以及 HLA-DRB1 等位基因与多发性硬化症 (MS) 之间的关联。
在这项病例对照研究中,从血液样本中分离和纯化基因组 DNA。使用 PCR 进行 HLA-DRB1 等位基因分型。扩增线粒体高变区 1,并使用 HaploGrep 软件确定单倍群。通过对一组祖源信息标记物进行基因分型来估计基因组祖源。为了检验 HLA 多态性与 MS 的关联,我们分别运行了多变量逻辑回归模型。使用 Bonferroni 校正来解释多重回归检验。
共纳入 100 例 MS 患者(平均年龄 40.4 ± 12 岁;70%为女性)和 200 例健康对照者(平均年龄 37.6 ± 11 岁;83.5%为女性)。病例组和对照组之间的祖源比例和单倍群频率没有差异。HLA-DRB115 在 31%的病例和 13.5%的对照组中存在,而 HLA-DRB114 在 5%的病例和 15.5%的对照组中存在。在多变量模型中,HLA-DRB115 与 MS 显著相关(比值比 [OR] = 3.05,p < 0.001),而 HLA-DRB114 被确认为我们人群中的保护性因素(OR = 0.16,p = 0.001)。
本研究提供的证据表明,HLA-DRB115 等位基因赋予 MS 易感性,而 HLA-DRB114 等位基因在高度混合人群中对 MS 具有抗性。这一发现部分解释了哥伦比亚波哥大 MS 患病率较低的原因。