Rohwer Nadine, Bindel Fabian, Grimm Christina, Lin Suling J, Wappler Jessica, Klinger Bertram, Blüthgen Nils, Du Bois Ilona, Schmeck Bernd, Lehrach Hans, de Graauw Marjo, Goncalves Emanuel, Saez-Rodriguez Julio, Tan Patrick, Grabsch Heike I, Prigione Alessandro, Kempa Stefan, Cramer Thorsten
Hepatologie und Gastroenterologie, Campus Virchow-Klinikum, Charité, Berlin, Germany.
German Cancer Consortium (DKTK), Heidelberg, Germany.
Oncotarget. 2016 Feb 9;7(6):6693-710. doi: 10.18632/oncotarget.6793.
Despite the approval of numerous molecular targeted drugs, long-term antiproliferative efficacy is rarely achieved and therapy resistance remains a central obstacle of cancer care. Combined inhibition of multiple cancer-driving pathways promises to improve antiproliferative efficacy. HIF-1 is a driver of gastric cancer and considered to be an attractive target for therapy. We noted that gastric cancer cells are able to functionally compensate the stable loss of HIF-1α. Via transcriptomics we identified a group of upregulated genes in HIF-1α-deficient cells and hypothesized that these genes confer survival upon HIF-1α loss. Strikingly, simultaneous knock-down of HIF-1α and Annexin A1 (ANXA1), one of the identified genes, resulted in complete cessation of proliferation. Using stable isotope-resolved metabolomics, oxidative and reductive glutamine metabolism was found to be significantly impaired in HIF-1α/ANXA1-deficient cells, potentially explaining the proliferation defect. In summary, we present a conceptually novel application of stable gene inactivation enabling in-depth deconstruction of resistance mechanisms. In theory, this experimental approach is applicable to any cancer-driving gene or pathway and promises to identify various new targets for combination therapies.
尽管众多分子靶向药物已获批准,但长期抗增殖疗效却鲜有实现,治疗耐药性仍是癌症治疗的核心障碍。联合抑制多种癌症驱动途径有望提高抗增殖疗效。缺氧诱导因子-1(HIF-1)是胃癌的驱动因素,被认为是一个有吸引力的治疗靶点。我们注意到胃癌细胞能够在功能上补偿HIF-1α的稳定缺失。通过转录组学,我们在HIF-1α缺陷细胞中鉴定出一组上调基因,并推测这些基因赋予了HIF-1α缺失后的生存能力。引人注目的是,同时敲低HIF-1α和其中一个已鉴定基因膜联蛋白A1(ANXA1),导致增殖完全停止。使用稳定同位素分辨代谢组学,发现HIF-1α/ANXA1缺陷细胞中的氧化型和还原型谷氨酰胺代谢显著受损,这可能解释了增殖缺陷。总之,我们提出了一种概念上新颖的稳定基因失活应用,能够深入解构耐药机制。理论上,这种实验方法适用于任何癌症驱动基因或途径,并有望识别出多种联合治疗的新靶点。