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2
A disease-causing mutation illuminates the protein membrane topology of the kidney-expressed prohibitin homology (PHB) domain protein podocin.致病突变阐明了肾脏表达的抑制素同源(PHB)域蛋白足细胞蛋白的蛋白膜拓扑结构。
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本文引用的文献

1
Three-layered proteomic characterization of a novel ACTN4 mutation unravels its pathogenic potential in FSGS.一种新型ACTN4突变的三层蛋白质组学特征揭示了其在局灶节段性肾小球硬化中的致病潜力。
Hum Mol Genet. 2016 Mar 15;25(6):1152-64. doi: 10.1093/hmg/ddv638. Epub 2016 Jan 5.
2
KANK deficiency leads to podocyte dysfunction and nephrotic syndrome.KANK缺乏会导致足细胞功能障碍和肾病综合征。
J Clin Invest. 2015 Jun;125(6):2375-84. doi: 10.1172/JCI79504. Epub 2015 May 11.
3
Proteomic analysis of the kidney filtration barrier--Problems and perspectives.肾脏滤过屏障的蛋白质组学分析——问题与展望。
Proteomics Clin Appl. 2015 Dec;9(11-12):1053-68. doi: 10.1002/prca.201400201. Epub 2015 Aug 11.
4
KCMF1 (potassium channel modulatory factor 1) Links RAD6 to UBR4 (ubiquitin N-recognin domain-containing E3 ligase 4) and lysosome-mediated degradation.KCMF1(钾通道调节因子1)将RAD6与UBR4(含泛素N识别结构域的E3连接酶4)以及溶酶体介导的降解联系起来。
Mol Cell Proteomics. 2015 Mar;14(3):674-85. doi: 10.1074/mcp.M114.042168. Epub 2015 Jan 12.
5
p600/UBR4 in the central nervous system.中枢神经系统中的p600/UBR4
Cell Mol Life Sci. 2015 Mar;72(6):1149-60. doi: 10.1007/s00018-014-1788-8. Epub 2014 Nov 26.
6
Comparative phosphoproteomic analysis of mammalian glomeruli reveals conserved podocin C-terminal phosphorylation as a determinant of slit diaphragm complex architecture.哺乳动物肾小球的比较磷酸化蛋白质组学分析揭示了保守的足突蛋白C末端磷酸化作为裂孔隔膜复合体结构的决定因素。
Proteomics. 2015 Apr;15(7):1326-31. doi: 10.1002/pmic.201400235. Epub 2015 Jan 19.
7
p600 stabilizes microtubules to prevent the aggregation of CaMKIIα during photoconductive stimulation.p600 稳定微管以防止光导刺激过程中 CaMKIIα 的聚集。
Cell Mol Biol Lett. 2014 Sep;19(3):381-92. doi: 10.2478/s11658-014-0201-9. Epub 2014 Jul 18.
8
Accurate proteome-wide label-free quantification by delayed normalization and maximal peptide ratio extraction, termed MaxLFQ.通过延迟归一化和最大肽段比率提取进行全蛋白质组精确的无标记定量,称为MaxLFQ。
Mol Cell Proteomics. 2014 Sep;13(9):2513-26. doi: 10.1074/mcp.M113.031591. Epub 2014 Jun 17.
9
All-atom empirical potential for molecular modeling and dynamics studies of proteins.蛋白质分子建模和动力学研究的全原子经验势。
J Phys Chem B. 1998 Apr 30;102(18):3586-616. doi: 10.1021/jp973084f.
10
Proteomic analysis of the epidermal growth factor receptor (EGFR) interactome and post-translational modifications associated with receptor endocytosis in response to EGF and stress.表皮生长因子受体(EGFR)相互作用组的蛋白质组学分析以及与受体因表皮生长因子(EGF)和应激发生内吞作用相关的翻译后修饰。
Mol Cell Proteomics. 2014 Jul;13(7):1644-58. doi: 10.1074/mcp.M114.038596. Epub 2014 May 5.

泛素连接酶Ubr4控制足突蛋白/MEC-2超复合物的稳定性。

The ubiquitin ligase Ubr4 controls stability of podocin/MEC-2 supercomplexes.

作者信息

Rinschen Markus M, Bharill Puneet, Wu Xiongwu, Kohli Priyanka, Reinert Matthäus J, Kretz Oliver, Saez Isabel, Schermer Bernhard, Höhne Martin, Bartram Malte P, Aravamudhan Sriram, Brooks Bernard R, Vilchez David, Huber Tobias B, Müller Roman-Ulrich, Krüger Marcus, Benzing Thomas

机构信息

Department II of Internal Medicine, Center for Molecular Medicine Cologne, Cologne Excellence Cluster on Cellular Stress Responses in Aging Associated Diseases (CECAD) and Systems Biology of Ageing Cologne (Sybacol), University of Cologne, Cologne, Germany,

Department II of Internal Medicine, Systems Biology of Ageing Cologne (Sybacol), University of Cologne, Cologne, Germany.

出版信息

Hum Mol Genet. 2016 Apr 1;25(7):1328-44. doi: 10.1093/hmg/ddw016. Epub 2016 Jan 19.

DOI:10.1093/hmg/ddw016
PMID:26792178
原文链接:
https://pmc.ncbi.nlm.nih.gov/articles/PMC4787903/
Abstract

The PHB-domain protein podocin maintains the renal filtration barrier and its mutation is an important cause of hereditary nephrotic syndrome. Podocin and its Caenorhabditis elegans orthologue MEC-2 have emerged as key components of mechanosensitive membrane protein signalling complexes. Whereas podocin resides at a specialized cell junction at the podocyte slit diaphragm, MEC-2 is found in neurons required for touch sensitivity. Here, we show that the ubiquitin ligase Ubr4 is a key component of the podocin interactome purified both from cultured podocytes and native glomeruli. It colocalizes with podocin and regulates its stability. In C. elegans, this process is conserved. Here, Ubr4 is responsible for the degradation of mislocalized MEC-2 multimers. Ubiquitylomic analysis of mouse glomeruli revealed that podocin is ubiquitylated at two lysine residues. These sites were Ubr4-dependent and were conserved across species. Molecular dynamics simulations revealed that ubiquitylation of one site, K301, do not only target podocin/MEC-2 for proteasomal degradation, but may also affect stability and disassembly of the multimeric complex. We suggest that Ubr4 is a key regulator of podocyte foot process proteostasis.

摘要

PHB 结构域蛋白足突蛋白维持肾脏滤过屏障,其突变是遗传性肾病综合征的重要病因。足突蛋白及其秀丽隐杆线虫同源物 MEC-2 已成为机械敏感膜蛋白信号复合物的关键组成部分。足突蛋白位于足细胞裂孔隔膜的特殊细胞连接处,而 MEC-2 则存在于触觉敏感所需的神经元中。在此,我们表明泛素连接酶 Ubr4 是从培养的足细胞和天然肾小球中纯化出的足突蛋白相互作用组的关键组成部分。它与足突蛋白共定位并调节其稳定性。在秀丽隐杆线虫中,这一过程是保守的。在这里,Ubr4 负责错误定位的 MEC-2 多聚体的降解。对小鼠肾小球的泛素化组分析表明,足突蛋白在两个赖氨酸残基处被泛素化。这些位点依赖于 Ubr4,并且在物种间保守。分子动力学模拟表明,一个位点 K301 的泛素化不仅靶向足突蛋白/MEC-2 进行蛋白酶体降解,还可能影响多聚体复合物的稳定性和解聚。我们认为 Ubr4 是足细胞足突蛋白稳态的关键调节因子。