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从松墨天牛(鞘翅目:天牛科)幼虫的全球转录组数据中鉴定与农药和生物学相关的基因

Identification of Genes Relevant to Pesticides and Biology from Global Transcriptome Data of Monochamus alternatus Hope (Coleoptera: Cerambycidae) Larvae.

作者信息

Wu Songqing, Zhu Xiaoli, Liu Zhaoxia, Shao Ensi, Rebeca Carballar-Lejarazú, Guo Yajie, Xiong Yueting, Mou Yani, Xu Runxue, Hu Xia, Liang Guanghong, Zou Shuangquan, Guan Xiong, Zhang Feiping

机构信息

College of Forestry, Fujian Agriculture and Forestry University, Fuzhou, 350002, People's Republic of China.

Fujian-Taiwan Joint Center for Ecological Control of Crop Pests, Fujian Agriculture and Forestry University, Fuzhou, 350002, People's Republic of China.

出版信息

PLoS One. 2016 Jan 27;11(1):e0147855. doi: 10.1371/journal.pone.0147855. eCollection 2016.

Abstract

Monochamus alternatus Hope is the main vector in China of the Pine Wilt Disease caused by the pine wood nematode Bursaphelenchus xylophilus. Although chemical control is traditionally used to prevent pine wilt disease, new strategies based in biological control are promising ways for the management of the disease. However, there is no deep sequence analysis of Monochamus alternatus Hope that describes the transcriptome and no information is available about gene function of this insect vector. We used next generation sequencing technology to sequence the whole fourth instar larva transcriptome of Monochamus alternatus Hope and successfully built a Monochamus alternatus Hope transcriptome database. In total, 105,612 unigenes were assigned for Gene Ontology (GO) terms, information for 16,730 classified unigenes was obtained in the Clusters of Orthologous Groups (COGs) database, and 13,024 unigenes matched with 224 predicted pathways in the Kyoto Encyclopedia of Genes and Genome (KEGG). In addition, genes related to putative insecticide resistance-related genes, RNAi, the Bt receptor, intestinal digestive enzymes, possible future insect control targets and immune-related molecules are described. This study provides valuable basic information that can be used as a gateway to develop new molecular tools for Monochamus alternatus Hope control strategies.

摘要

松墨天牛是中国松材线虫引起的松材线虫病的主要传播媒介。尽管传统上使用化学防治来预防松材线虫病,但基于生物防治的新策略是管理该疾病的有前景的方法。然而,目前尚无对松墨天牛的深度序列分析来描述其转录组,也没有关于这种昆虫媒介基因功能的信息。我们使用下一代测序技术对松墨天牛整个四龄幼虫转录组进行测序,并成功构建了松墨天牛转录组数据库。总共为105,612个单基因分配了基因本体论(GO)术语,在直系同源簇(COG)数据库中获得了16,730个分类单基因的信息,并且13,024个单基因与京都基因与基因组百科全书(KEGG)中的224条预测途径相匹配。此外,还描述了与假定的抗杀虫剂相关基因、RNA干扰、Bt受体、肠道消化酶、未来可能的昆虫控制靶点和免疫相关分子有关的基因。本研究提供了有价值的基础信息,可作为开发用于松墨天牛控制策略的新分子工具的切入点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0bdf/4729689/2d70aaff8c0a/pone.0147855.g001.jpg

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