Hammerl Jens A, Göllner Cornelia, Al Dahouk Sascha, Nöckler Karsten, Reetz Jochen, Hertwig Stefan
Department of Biological Safety, Federal Institute for Risk Assessment Berlin, Germany.
Front Microbiol. 2016 Jan 28;7:24. doi: 10.3389/fmicb.2016.00024. eCollection 2016.
Brucella species are important human and animal pathogens. Though, only little is known about mobile genetic elements of these highly pathogenic bacteria. To date, neither plasmids nor temperate phages have been described in brucellae. We analyzed genomic sequences of various reference and type strains and identified a number of putative prophages residing within the Brucella chromosomes. By induction, phage BiPBO1 was isolated from Brucella inopinata. BiPBO1 is a siphovirus that infects several Brucella species including Brucella abortus and Brucella melitensis. Integration of the phage genome occurs adjacent to a tRNA gene in chromosome 1 (chr 1). The bacterial (attB) and phage (attP) attachment sites comprise an identical sequence of 46 bp. This sequence exists in many Brucella and Ochrobactrum species. The BiPBO1 genome is composed of a 46,877 bp double-stranded DNA. Eighty-seven putative gene products were determined, of which 32 could be functionally assigned. Strongest similarities were found to a temperate phage residing in the chromosome of Ochrobactrum anthropi ATCC 49188 and to prophages identified in several families belonging to the order rhizobiales. The data suggest that horizontal gene transfer may occur between Brucella and Ochrobactrum and underpin the close relationship of these environmental and pathogenic bacteria.
布鲁氏菌属是重要的人类和动物病原体。然而,对于这些高致病性细菌的可移动遗传元件却知之甚少。迄今为止,尚未在布鲁氏菌中描述过质粒或温和噬菌体。我们分析了各种参考菌株和模式菌株的基因组序列,在布鲁氏菌染色体中鉴定出了一些推定的原噬菌体。通过诱导,从意外布鲁氏菌中分离出噬菌体BiPBO1。BiPBO1是一种长尾噬菌体,可感染包括流产布鲁氏菌和羊种布鲁氏菌在内的多种布鲁氏菌。噬菌体基因组整合发生在1号染色体(chr 1)上的一个tRNA基因附近。细菌附着位点(attB)和噬菌体附着位点(attP)包含一段46 bp的相同序列。该序列存在于许多布鲁氏菌和慢生根瘤菌属物种中。BiPBO1基因组由46,877 bp的双链DNA组成。确定了87个推定的基因产物,其中32个可以进行功能分配。发现与栖居于嗜人慢生根瘤菌ATCC 49188染色体上的一种温和噬菌体以及在根瘤菌目几个科中鉴定出的原噬菌体具有最强的相似性。这些数据表明布鲁氏菌和慢生根瘤菌之间可能发生水平基因转移,并支持了这些环境细菌和致病细菌之间的密切关系。