• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利：CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法，用中文像聊天一样搜索，搜遍4000万医学文献。AI智能推荐，让科研检索更轻松。

立即免费搜索

文件翻译

保留排版，准确专业，支持PDF/Word/PPT等文件格式，支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述，25分钟生成高质量综述，智能提取关键信息，辅助科研写作。

立即免费体验

相似文献

1
Metagenomic data of the bacterial community in coastal Gulf of Mexico sediment microcosms following exposure to Macondo oil (MC252).墨西哥湾沿海沉积物微观世界中细菌群落暴露于马孔多原油（MC252）后的宏基因组数据。
Data Brief. 2015 Nov 26;6:89-93. doi: 10.1016/j.dib.2015.11.040. eCollection 2016 Mar.
2
Bacterial community shift in the coastal Gulf of Mexico salt-marsh sediment microcosm in vitro following exposure to the Mississippi Canyon Block 252 oil (MC252).在体外暴露于密西西比峡谷252号油（MC252）后，墨西哥湾沿岸盐沼沉积物微观世界中的细菌群落变化。
3 Biotech. 2015 Aug;5(4):379-392. doi: 10.1007/s13205-014-0233-x. Epub 2014 Jul 10.
3
Comparative analysis of bacterial community-metagenomics in coastal Gulf of Mexico sediment microcosms following exposure to Macondo oil (MC252).墨西哥湾沿海沉积物微观世界在暴露于马孔多原油（MC252）后细菌群落宏基因组学的比较分析
Antonie Van Leeuwenhoek. 2014 Nov;106(5):993-1009. doi: 10.1007/s10482-014-0268-3. Epub 2014 Sep 10.
4
Metagenomic data of free cyanide and thiocyanate degrading bacterial communities.游离氰化物和硫氰酸盐降解细菌群落的宏基因组数据。
Data Brief. 2017 Jul 4;13:738-741. doi: 10.1016/j.dib.2017.06.049. eCollection 2017 Aug.
5
High-throughput amplicon sequencing datasets of coastal sediments from three locations of the Gulf of Mexico, USA.来自美国墨西哥湾三个地点的沿海沉积物的高通量扩增子测序数据集。
Data Brief. 2023 Jan 11;47:108895. doi: 10.1016/j.dib.2023.108895. eCollection 2023 Apr.
6
Metagenomic data of bacterial community from different land uses at the river basin, Kelantan.吉兰丹河流域不同土地利用类型下细菌群落的宏基因组数据。
Data Brief. 2020 Sep 28;33:106351. doi: 10.1016/j.dib.2020.106351. eCollection 2020 Dec.
7
Metagenomic data on bacterial diversity profiling of Arabian sea sediment by amplicon sequencing.通过扩增子测序对阿拉伯海沉积物细菌多样性进行分析的宏基因组数据。
Data Brief. 2019 Nov 11;28:104791. doi: 10.1016/j.dib.2019.104791. eCollection 2020 Feb.
8
Metagenomic data of fungal internal transcribed Spacer and 18S rRNA gene sequences from Lonar lake sediment, India.来自印度洛纳湖沉积物的真菌内转录间隔区和18S rRNA基因序列的宏基因组数据。
Data Brief. 2015 Jun 18;4:266-8. doi: 10.1016/j.dib.2015.06.001. eCollection 2015 Sep.
9
Bacterial tag encoded FLX titanium amplicon pyrosequencing (bTEFAP) based assessment of prokaryotic diversity in metagenome of Lonar soda lake, India.基于细菌标签编码的FLX钛扩增子焦磷酸测序（bTEFAP）对印度洛纳尔碱湖宏基因组中原核生物多样性的评估。
Genom Data. 2015 Feb 7;4:8-11. doi: 10.1016/j.gdata.2015.01.010. eCollection 2015 Jun.
10
Metagenomic profiling dataset of bacterial communities of a drinking water supply system (DWSS) in the arid Namaqualand region, South Africa: Source (lower Orange River) to point-of-use (O'Kiep).南非干旱的纳马夸兰地区一个饮用水供应系统（DWSS）细菌群落的宏基因组分析数据集：水源地（奥兰治河下游）至使用点（奥凯普）。
Data Brief. 2019 Jun 11;25:104135. doi: 10.1016/j.dib.2019.104135. eCollection 2019 Aug.

引用本文的文献

1
High-throughput amplicon sequencing datasets of coastal sediments from three locations of the Gulf of Mexico, USA.来自美国墨西哥湾三个地点的沿海沉积物的高通量扩增子测序数据集。
Data Brief. 2023 Jan 11;47:108895. doi: 10.1016/j.dib.2023.108895. eCollection 2023 Apr.

本文引用的文献

1
Bacterial community shift in the coastal Gulf of Mexico salt-marsh sediment microcosm in vitro following exposure to the Mississippi Canyon Block 252 oil (MC252).在体外暴露于密西西比峡谷252号油（MC252）后，墨西哥湾沿岸盐沼沉积物微观世界中的细菌群落变化。
3 Biotech. 2015 Aug;5(4):379-392. doi: 10.1007/s13205-014-0233-x. Epub 2014 Jul 10.
2
Comparative analysis of bacterial community-metagenomics in coastal Gulf of Mexico sediment microcosms following exposure to Macondo oil (MC252).墨西哥湾沿海沉积物微观世界在暴露于马孔多原油（MC252）后细菌群落宏基因组学的比较分析
Antonie Van Leeuwenhoek. 2014 Nov;106(5):993-1009. doi: 10.1007/s10482-014-0268-3. Epub 2014 Sep 10.
3
Tracking hydrocarbon plume transport and biodegradation at Deepwater Horizon.追踪“深水地平线”油井中的碳氢化合物羽流运移和生物降解。
Science. 2010 Oct 8;330(6001):201-4. doi: 10.1126/science.1195223. Epub 2010 Aug 19.
4
Evaluation of the bacterial diversity in the feces of cattle using 16S rDNA bacterial tag-encoded FLX amplicon pyrosequencing (bTEFAP).使用16S rDNA细菌标签编码的FLX扩增子焦磷酸测序（bTEFAP）评估牛粪便中的细菌多样性。
BMC Microbiol. 2008 Jul 24;8:125. doi: 10.1186/1471-2180-8-125.
5
Microbial community dynamics during assays of harbour oil spill bioremediation: a microscale simulation study.港口溢油生物修复实验中的微生物群落动态：一项微观尺度模拟研究
J Appl Microbiol. 2007 Jan;102(1):184-94. doi: 10.1111/j.1365-2672.2006.03071.x.
6
Bacterial community dynamics and hydrocarbon degradation during a field-scale evaluation of bioremediation on a mudflat beach contaminated with buried oil.在对受埋地石油污染的泥滩海滩进行生物修复的现场规模评估期间的细菌群落动态和碳氢化合物降解。
Appl Environ Microbiol. 2004 May;70(5):2603-13. doi: 10.1128/AEM.70.5.2603-2613.2004.
7
Oil-spill identification by gas chromatography-mass spectrometry.
J Chromatogr Sci. 2003 May-Jun;41(5):271-3. doi: 10.1093/chromsci/41.5.271.
8
Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA.通过对聚合酶链反应扩增的编码16S rRNA的基因进行变性梯度凝胶电泳分析来剖析复杂微生物群落。
Appl Environ Microbiol. 1993 Mar;59(3):695-700. doi: 10.1128/aem.59.3.695-700.1993.
9
Rapid determination of 16S ribosomal RNA sequences for phylogenetic analyses.用于系统发育分析的16S核糖体RNA序列的快速测定。
Proc Natl Acad Sci U S A. 1985 Oct;82(20):6955-9. doi: 10.1073/pnas.82.20.6955.

墨西哥湾沿海沉积物微观世界中细菌群落暴露于马孔多原油（MC252）后的宏基因组数据。

Metagenomic data of the bacterial community in coastal Gulf of Mexico sediment microcosms following exposure to Macondo oil (MC252).

作者信息

Koo Hyunmin, Bej Asim K

机构信息

Department of Biology, University of Alabama at Birmingham, Birmingham, AL, USA.

出版信息

Data Brief. 2015 Nov 26;6:89-93. doi: 10.1016/j.dib.2015.11.040. eCollection 2016 Mar.

DOI:10.1016/j.dib.2015.11.040
PMID:26858973
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4706563/
Abstract

The data in this article includes the sequences of bacterial 16S rRNA gene from metagenome of Macondo oil (MC252)-treated and non-oil-treated sediment microcosms, collected from coastal Gulf of Mexico and Bayou La Batre, USA. Metacommunity DNA was PCR amplified with 341F and 907R oligonucleotide primers, targeting V3-V5 regions of the 16S rRNA gene. Data were generated by using bacterial tag-encoded FLX-amplicon pyrosequencing (bTEFAP) methodology and then processed using bioinformatics tools such as QIIME. The data information is deposited to NCBI׳s BioProject and BioSample and raw sequence files are available via NCBI׳s Sequence Read Archive (SRA) database.

摘要

本文中的数据包括来自美国墨西哥湾沿岸和拉巴特湾经马孔多原油（MC252）处理和未经原油处理的沉积物微观世界宏基因组的细菌16S rRNA基因序列。使用341F和907R寡核苷酸引物对元群落DNA进行PCR扩增，靶向16S rRNA基因的V3-V5区域。数据通过细菌标签编码的FLX扩增子焦磷酸测序（bTEFAP）方法生成，然后使用QIIME等生物信息学工具进行处理。数据信息已存入NCBI的生物项目和生物样本，原始序列文件可通过NCBI的序列读取存档（SRA）数据库获得。