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本文引用的文献

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Comparative genomics of Pseudomonas syringae pv. syringae strains B301D and HS191 and insights into intrapathovar traits associated with plant pathogenesis.丁香假单胞菌丁香致病变种菌株B301D和HS191的比较基因组学以及对与植物致病相关的种下特征的见解。
Microbiologyopen. 2015 Aug;4(4):553-73. doi: 10.1002/mbo3.261. Epub 2015 May 4.
2
High-Quality Draft Genome Sequence of Xanthomonas alfalfae subsp. alfalfae Strain CFBP 3836.苜蓿黄单胞菌苜蓿亚种CFBP 3836菌株的高质量基因组草图序列
Genome Announc. 2013 Dec 12;1(6):e01035-13. doi: 10.1128/genomeA.01035-13.
3
High-Quality Draft Genome Sequence of Pseudomonas syringae pv. Syringae Strain SM, Isolated from Wheat.从小麦中分离的丁香假单胞菌丁香致病变种菌株SM的高质量基因组草图序列
Genome Announc. 2013 Aug 15;1(4):e00610-13. doi: 10.1128/genomeA.00610-13.
4
Draft genome sequence of Pseudomonas syringae pathovar syringae strain FF5, causal agent of stem tip dieback disease on ornamental pear.丁香假单胞菌丁香致病变种 FF5 菌株的基因组草案序列，该菌是观赏梨树茎尖枯死病的致病菌。
J Bacteriol. 2012 Jul;194(14):3733-4. doi: 10.1128/JB.00567-12.
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Dynamic evolution of pathogenicity revealed by sequencing and comparative genomics of 19 Pseudomonas syringae isolates.19 个丁香假单胞菌分离株的测序和比较基因组学揭示的致病性动态演变。
PLoS Pathog. 2011 Jul;7(7):e1002132. doi: 10.1371/journal.ppat.1002132. Epub 2011 Jul 14.
6
The sequence read archive.序列读取存档库。
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Pseudomonas syringae strains naturally lacking the classical P. syringae hrp/hrc Locus are common leaf colonizers equipped with an atypical type III secretion system.丁香假单胞菌菌株自然缺乏经典的丁香假单胞菌 hrp/hrc 基因座，是常见的叶片定殖菌，配备有非典型的 III 型分泌系统。
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Toward an online repository of Standard Operating Procedures (SOPs) for (meta)genomic annotation.迈向用于（宏）基因组注释的标准操作程序（SOP）在线存储库。
OMICS. 2008 Jun;12(2):137-41. doi: 10.1089/omi.2008.0017.
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Velvet: algorithms for de novo short read assembly using de Bruijn graphs.《天鹅绒：使用德布鲁因图进行从头短读长拼接的算法》
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Comparison of the complete genome sequences of Pseudomonas syringae pv. syringae B728a and pv. tomato DC3000.丁香假单胞菌丁香致病变种B728a和番茄致病变种DC3000全基因组序列的比较。
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从苜蓿中分离得到的丁香假单胞菌丁香致病变种ALF3的基因组序列草图

Draft Genome Sequence of Pseudomonas syringae pv. syringae ALF3 Isolated from Alfalfa.

作者信息

Harrison James, Dornbusch Melinda R, Samac Deborah, Studholme David J

机构信息

Biosciences, University of Exeter, Devon, United Kingdom.

USDA-ARS, Plant Science Research Unit, St. Paul, Minnesota, USA.

出版信息

Genome Announc. 2016 Feb 11;4(1):e01722-15. doi: 10.1128/genomeA.01722-15.

DOI:10.1128/genomeA.01722-15
PMID:26868403
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4751327/
Abstract

We report here the annotated draft genome sequence of Pseudomonas syringae pv. syringae strain ALF3, isolated in Wyoming. A comparison of this genome sequence with those of closely related strains of P. syringae adapted to other hosts will facilitate research into interactions between this pathogen and alfalfa.

摘要

我们在此报告从怀俄明州分离出的丁香假单胞菌丁香致病变种ALF3菌株的带注释基因组序列草图。将该基因组序列与适应其他宿主的丁香假单胞菌密切相关菌株的序列进行比较，将有助于研究这种病原体与苜蓿之间的相互作用。