Suppr超能文献

核 m(6)A 读码器 YTHDC1 调控 mRNA 剪接。

Nuclear m(6)A Reader YTHDC1 Regulates mRNA Splicing.

机构信息

Key Laboratory of Genomic and Precision Medicine, Collaborative Innovation Center of Genetics and Development, CAS Center for Excellence in Molecular Cell Science, Beijing Institute of Genomics, Chinese Academy of Sciences, Beijing 100101, China; University of Chinese Academy of Sciences, Beijing 100049, China.

Key Laboratory of Genomic and Precision Medicine, Collaborative Innovation Center of Genetics and Development, CAS Center for Excellence in Molecular Cell Science, Beijing Institute of Genomics, Chinese Academy of Sciences, Beijing 100101, China; Key Laboratory of Genomic and Precision Medicine, China Gastrointestinal Cancer Research Center, Beijing Institute of Genomics, Chinese Academy of Sciences, Beijing 100101, China.

出版信息

Mol Cell. 2016 Feb 18;61(4):507-519. doi: 10.1016/j.molcel.2016.01.012. Epub 2016 Feb 11.

Abstract

The regulatory role of N(6)-methyladenosine (m(6)A) and its nuclear binding protein YTHDC1 in pre-mRNA splicing remains an enigma. Here we show that YTHDC1 promotes exon inclusion in targeted mRNAs through recruiting pre-mRNA splicing factor SRSF3 (SRp20) while blocking SRSF10 (SRp38) mRNA binding. Transcriptome assay with PAR-CLIP-seq analysis revealed that YTHDC1-regulated exon-inclusion patterns were similar to those of SRSF3 but opposite of SRSF10. In vitro pull-down assay illustrated a competitive binding of SRSF3 and SRSF10 to YTHDC1. Moreover, YTHDC1 facilitates SRSF3 but represses SRSF10 in their nuclear speckle localization, RNA-binding affinity, and associated splicing events, dysregulation of which, as the result of YTHDC1 depletion, can be restored by reconstitution with wild-type, but not m(6)A-binding-defective, YTHDC1. Our findings provide the direct evidence that m(6)A reader YTHDC1 regulates mRNA splicing through recruiting and modulating pre-mRNA splicing factors for their access to the binding regions of targeted mRNAs.

摘要

N(6)-甲基腺苷(m(6)A)及其核结合蛋白 YTHDC1 在 mRNA 前体剪接中的调控作用仍然是一个谜。在这里,我们表明 YTHDC1 通过招募 mRNA 前体剪接因子 SRSF3(SRp20)来促进靶向 mRNA 的外显子包含,同时阻止 SRSF10(SRp38)mRNA 结合。通过 PAR-CLIP-seq 分析的转录组测定表明,YTHDC1 调节的外显子包含模式与 SRSF3 相似,但与 SRSF10 相反。体外下拉测定说明了 SRSF3 和 SRSF10 与 YTHDC1 的竞争性结合。此外,YTHDC1 促进 SRSF3 但抑制 SRSF10 在其核斑点定位、RNA 结合亲和力和相关剪接事件中的定位,由于 YTHDC1 耗竭导致的这些调节的失衡,可以通过用野生型而非 m(6)A 结合缺陷型 YTHDC1 重建来恢复。我们的发现提供了直接证据,表明 m(6)A 读取器 YTHDC1 通过招募和调节 mRNA 前体剪接因子来调节 mRNA 剪接,以便它们能够进入靶向 mRNA 的结合区域。

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验