Xu Yingjia, Huang Ritai, Gu Jianing, Jiang Weifeng
Department of Cardiology, Shanghai Chest Hospital, Shanghai Jiao Tong University, Shanghai, China.
Department of Cardiothoracic Surgery, Ren Ji Hospital, School of Medicine, Shanghai JiaoTong University, Shanghai, China.
Oncotarget. 2016 Mar 8;7(10):10803-11. doi: 10.18632/oncotarget.7514.
Atrial fibrillation (AF) is a highly prevalent cardiac arrhythmia disease, which widely leads to exacerbate heart failure and ischemic stroke in elder world. Recently, long non-coding RNAs (lncRNAs), a subclass of noncoding RNAs, have been reported to play critical roles in pathophysiology of cardiac heart. However, little is known of their role in cardiac arrhythmia. In the present study, we investigated the expression levels of lncRNAs of AF patients and healthy people with Agilent Human lncRNA array for the first time. 177 lncRNAs of 78243 and 153 mRNAs of 30215 tested were identified to be differentially expressed (≥ 2-fold change), indicating that the expression of many lncRNAs are upregulated or downregulated in AF. Among these, NONHSAT040387 and NONHSAT098586 were the most upregulated and downregulated lncRNAs. Real time quantitative PCR were employed to validate the microarray analysis findings, and the results confirmed the consistence. GO and KEGG pathway analysis were applied to explore the potential lncRNAs functions, some pathways including oxygen transporter activity and protein heterodimerization activity were speculated to be involved in AF pathogenesis. These results shed some light on lncRNAs' physiologic functions and provide useful information for exploring potential therapeutic treatments for heart rhythm disease.
心房颤动(AF)是一种高度流行的心律失常疾病,在老年人群中广泛导致心力衰竭加重和缺血性中风。最近,长链非编码RNA(lncRNAs)作为非编码RNA的一个亚类,已被报道在心脏病理生理学中发挥关键作用。然而,它们在心律失常中的作用却鲜为人知。在本研究中,我们首次使用安捷伦人类lncRNA芯片调查了AF患者和健康人的lncRNA表达水平。在检测的78243个lncRNA中的177个以及30215个mRNA中的153个被鉴定为差异表达(≥2倍变化),表明在AF中许多lncRNA的表达上调或下调。其中,NONHSAT040387和NONHSAT098586是上调和下调最明显的lncRNA。采用实时定量PCR验证芯片分析结果,结果证实了一致性。应用GO和KEGG通路分析来探索潜在的lncRNA功能,推测一些通路包括氧转运体活性和蛋白质异二聚化活性参与AF发病机制。这些结果为lncRNA的生理功能提供了一些线索,并为探索心律失常疾病的潜在治疗方法提供了有用信息。