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基于巢式关联作图(NAM)的骨干自交系杂种 B73 及其地理起源不同的地方品种的籽粒代谢组学评估:GC-MS 和 NMR 分析

Metabolomic Assessment of Key Maize Resources: GC-MS and NMR Profiling of Grain from B73 Hybrids of the Nested Association Mapping (NAM) Founders and of Geographically Diverse Landraces.

机构信息

Monsanto Company , 800 North Lindbergh Boulevard, St. Louis, Missouri 63167, United States.

Genome Center - Metabolomics, University of California at Davis , Davis, California 95616, United States.

出版信息

J Agric Food Chem. 2016 Mar 16;64(10):2162-72. doi: 10.1021/acs.jafc.5b04901. Epub 2016 Mar 7.

Abstract

The present study expands metabolomic assessments of maize beyond commercial lines to include two sets of hybrids used extensively in the scientific community. One set included hybrids derived from the nested association mapping (NAM) founder lines, a collection of 25 inbreds selected on the basis of genetic diversity and used to investigate the genetic basis of complex plant traits. A second set included 24 hybrids derived from a collection of landraces representative of native diversity from North and South America that may serve as a source of new alleles for improving modern maize hybrids. Metabolomic analysis of grain harvested from these hybrids utilized gas chromatography-time-of-flight mass spectrometry (GC-TOF-MS) and (1)H nuclear magnetic resonance spectroscopy ((1)H NMR) techniques. Results highlighted extensive metabolomic variation in grain from both hybrid sets, but also demonstrated that, within each hybrid set, subpopulations could be differentiated in a pattern consistent with the known genetic and compositional variation of these lines. Correlation analysis did not indicate a strong association of the metabolomic data with grain nutrient composition, although some metabolites did show moderately strong correlations with agronomic features such as plant and ear height. Overall, this study provides insights into the extensive metabolomic diversity associated with conventional maize germplasm.

摘要

本研究将玉米的代谢组学评估从商业品种扩展到包括两套广泛应用于科学界的杂交种。一套包括源自嵌套关联作图(NAM)起始系的杂交种,这是一组 25 个基于遗传多样性选择的自交系,用于研究复杂植物性状的遗传基础。第二套包括 24 个源自北美的本土多样性的地方品种的杂交种和南美的可能作为改良现代玉米杂交种的新等位基因的来源。从这些杂交种中收获的谷物的代谢组学分析利用了气相色谱-飞行时间质谱(GC-TOF-MS)和(1)H 核磁共振波谱((1)H NMR)技术。结果突出了两个杂交种群粒中的广泛代谢组学变异,但也表明,在每个杂交种群内,可以根据这些系的已知遗传和组成变异模式来区分亚群。相关性分析并未表明代谢组学数据与谷物营养成分有很强的关联,尽管一些代谢物与农艺特征(如植物和穗高)有中度强的关联。总的来说,这项研究提供了对传统玉米种质广泛代谢组多样性的深入了解。

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