Schumacher Charlotte Helene, Körschen Heinz G, Nicol Christopher, Gasser Carlos, Seifert Reinhard, Schwärzel Martin, Möglich Andreas
Institut für Biologie, Biophysikalische Chemie, Humboldt-Universität zu Berlin, Berlin, Germany.
Department of Molecular Sensory Systems, Research Center Caesar, Bonn, Germany.
Methods Mol Biol. 2016;1408:93-105. doi: 10.1007/978-1-4939-3512-3_7.
As a transformative approach in neuroscience and cell biology, optogenetics grants control over manifold cellular events with unprecedented spatiotemporal definition, reversibility, and noninvasiveness. Sensory photoreceptors serve as genetically encoded, light-regulated actuators and hence embody the cornerstone of optogenetics. To expand the scope of optogenetics, ever more naturally occurring photoreceptors are being characterized, and synthetic photoreceptors with customized, light-regulated function are being engineered. Perturbational control over intracellular cyclic-nucleotide-monophosphate (cNMP) levels is achieved via sensory photoreceptors that catalyze the making and breaking of these second messengers in response to light. To facilitate discovery, engineering and quantitative characterization of such light-regulated cNMP actuators, we have developed an efficient fluorometric assay. Both the formation and the hydrolysis of cNMPs are accompanied by proton release which can be quantified with the fluorescent pH indicator 2',7'-bis-(2-carboxyethyl)-5-(and-6)-carboxyfluorescein (BCECF). This assay equally applies to nucleotide cyclases, e.g., blue-light-activated bPAC, and to cNMP phosphodiesterases, e.g., red-light-activated LAPD. Key benefits include potential for parallelization and automation, as well as suitability for both purified enzymes and crude cell lysates. The BCECF assay hence stands to accelerate discovery and characterization of light-regulated actuators of cNMP metabolism.
作为神经科学和细胞生物学中的一种变革性方法,光遗传学能够以前所未有的时空分辨率、可逆性和非侵入性控制多种细胞事件。感官光感受器作为基因编码的、光调控的促动器,因此是光遗传学的基石。为了扩大光遗传学的范围,越来越多天然存在的光感受器正在被表征,具有定制光调控功能的合成光感受器也正在被设计。通过感官光感受器实现对细胞内环磷酸核苷酸(cNMP)水平的扰动控制,这些感受器响应光催化这些第二信使的合成和分解。为了促进此类光调控cNMP促动器的发现、工程设计和定量表征,我们开发了一种高效的荧光测定法。cNMP的形成和水解都伴随着质子释放,这可以用荧光pH指示剂2',7'-双(2-羧乙基)-5-(和-6)-羧基荧光素(BCECF)进行定量。该测定法同样适用于核苷酸环化酶,例如蓝光激活的bPAC,以及cNMP磷酸二酯酶,例如红光激活的LAPD。主要优点包括可并行化和自动化的潜力,以及适用于纯化酶和粗细胞裂解物。因此,BCECF测定法有望加速cNMP代谢光调控促动器的发现和表征。