Kaewkla Onuma, Franco Christopher Milton Mathew
Department of Biology, Faculty of Science, Mahasarakham University, Maha Sarakham Province 44150, Thailand.
Department of Medical Biotechnology, School of Medicine, Flinders University, Bedford Park, SA 5042, Australia.
Int J Syst Evol Microbiol. 2016 Jun;66(6):2284-2290. doi: 10.1099/ijsem.0.001023. Epub 2016 Mar 15.
An endophytic actinobacterium, strain PIP 158T, was isolated from the stem of a native apricot tree (Pittosporum angustifolium) collected from the grounds of Flinders University, Adelaide, Australia. As a result of a polyphasic taxonomic study, this strain was identified as a member of the genus Kribbella. This strain was a Gram-stain-positive, aerobic actinobacterium with well-developed substrate mycelia which were non-motile and with hyphae fragmenting into short to elongated rod-like elements. Phylogenetic evaluation based on 16S rRNA gene sequence analysis placed this isolate in the family Nocardioidaceae, being most closely related to Kribbella sandramycini ATCC 39419T and Kribbella albertanoniae BC640T which share a similarity of 99. 26 and 99.18 % with Kribbella hippodromi S1.4T, respectively. Chemotaxonomic data including cell-wall components, major menaquinones and major fatty acids confirmed the affiliation of strain PIP 158T to the genus Kribbella. The results of the phylogenetic analysis, including physiological and biochemical studies in combination with DNA-DNA hybridization, allowed the genotypic and phenotypic differentiation of strain PIP 158T from the closest related species with validly published names. The name proposed for the novel species is Kribbella pittospori sp. nov. The type strain is PIP 158T (=DSM 23717T=NRRL B-24813T).
从澳大利亚阿德莱德弗林德斯大学校园采集的本地杏树(狭叶海桐)茎中分离出一株内生放线菌,菌株PIP 158T。经过多相分类学研究,该菌株被鉴定为克里贝拉属的成员。该菌株为革兰氏阳性需氧放线菌,具有发育良好的基质菌丝体,不运动,菌丝断裂成短至细长的杆状元件。基于16S rRNA基因序列分析的系统发育评估将该分离株置于诺卡氏菌科,与克里贝拉桑德拉霉素ATCC 39419T和克里贝拉阿尔伯塔诺尼亚BC640T关系最为密切,它们与克里贝拉赛马场菌S1.4T的相似度分别为99.26%和99.18%。包括细胞壁成分、主要甲基萘醌和主要脂肪酸在内的化学分类学数据证实了菌株PIP 158T属于克里贝拉属。系统发育分析结果,包括生理生化研究以及DNA-DNA杂交,使得菌株PIP 158T能够与已有效发表名称的最密切相关物种进行基因型和表型区分。为该新物种提议的名称是克里贝拉海桐菌。模式菌株为PIP 158T(=DSM 23717T=NRRL B-24813T)。