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结构建模和转录反应表明,一类小立碗藓属PpKAI2-LIKE基因是独脚金内酯在小立碗藓中的候选受体。

Structural modelling and transcriptional responses highlight a clade of PpKAI2-LIKE genes as candidate receptors for strigolactones in Physcomitrella patens.

作者信息

Lopez-Obando Mauricio, Conn Caitlin E, Hoffmann Beate, Bythell-Douglas Rohan, Nelson David C, Rameau Catherine, Bonhomme Sandrine

机构信息

Institut Jean-Pierre Bourgin, INRA, AgroParisTech, CNRS, Université Paris-Saclay, RD10, 78026, Versailles Cedex, France.

Department of Genetics, University of Georgia, Athens, GA, 30602, USA.

出版信息

Planta. 2016 Jun;243(6):1441-53. doi: 10.1007/s00425-016-2481-y. Epub 2016 Mar 15.

Abstract

A set of PpKAI2 - LIKE paralogs that may encode strigolactone receptors in Physcomitrella patens were identified through evolutionary, structural, and transcriptional analyses, suggesting that strigolactone perception may have evolved independently in basal land plants in a similar manner as spermatophytes. Carotenoid-derived compounds known as strigolactones are a new class of plant hormones that modulate development and interactions with parasitic plants and arbuscular mycorrhizal fungi. The strigolactone receptor protein DWARF14 (D14) belongs to the α/β hydrolase family. D14 is closely related to KARRIKIN INSENSITIVE2 (KAI2), a receptor of smoke-derived germination stimulants called karrikins. Strigolactone and karrikin structures share a butenolide ring that is necessary for bioactivity. Charophyte algae and basal land plants produce strigolactones that influence their development. However phylogenetic studies suggest that D14 is absent from algae, moss, and liverwort genomes, raising the question of how these basal plants perceive strigolactones. Strigolactone perception during seed germination putatively evolved in parasitic plants through gene duplication and neofunctionalization of KAI2 paralogs. The moss Physcomitrella patens shows an increase in KAI2 gene copy number, similar to parasitic plants. In this study we investigated whether P. patens KAI2-LIKE (PpKAI2L) genes may contribute to strigolactone perception. Based on phylogenetic analyses and homology modelling, we predict that a clade of PpKAI2L proteins have enlarged ligand-binding cavities, similar to D14. We observed that some PpKAI2L genes have transcriptional responses to the synthetic strigolactone GR24 racemate or its enantiomers. These responses were influenced by light and dark conditions. Moreover, (+)-GR24 seems to be the active enantiomer that induces the transcriptional responses of PpKAI2L genes. We hypothesize that members of specific PpKAI2L clades are candidate strigolactone receptors in moss.

摘要

通过进化、结构和转录分析,在小立碗藓中鉴定出一组可能编码独脚金内酯受体的PpKAI2 - LIKE旁系同源基因,这表明独脚金内酯的感知可能在基部陆地植物中以与种子植物类似的方式独立进化。类胡萝卜素衍生的化合物独脚金内酯是一类新型植物激素,可调节植物发育以及与寄生植物和丛枝菌根真菌的相互作用。独脚金内酯受体蛋白DWARF14(D14)属于α/β水解酶家族。D14与KARRIKIN INSENSITIVE2(KAI2)密切相关,KAI2是一种名为卡里金的烟雾衍生萌发刺激物的受体。独脚金内酯和卡里金的结构都有一个对生物活性至关重要的丁烯内酯环。轮藻和基部陆地植物会产生影响其发育的独脚金内酯。然而,系统发育研究表明,藻类、苔藓和地钱的基因组中不存在D14,这就提出了这些基部植物如何感知独脚金内酯的问题。种子萌发过程中独脚金内酯的感知可能是通过寄生植物中KAI2旁系同源基因的基因复制和新功能化而进化来的。苔藓小立碗藓的KAI2基因拷贝数增加,与寄生植物类似。在本研究中,我们调查了小立碗藓PpKAI2 - LIKE(PpKAI2L)基因是否可能参与独脚金内酯的感知。基于系统发育分析和同源建模,我们预测PpKAI2L蛋白的一个进化枝具有扩大的配体结合腔,类似于D14。我们观察到一些PpKAI2L基因对合成独脚金内酯GR24外消旋体或其对映体有转录反应。这些反应受光照和黑暗条件的影响。此外,(+)-GR24似乎是诱导PpKAI2L基因转录反应的活性对映体。我们假设特定PpKAI2L进化枝的成员是苔藓中独脚金内酯受体的候选者。

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