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利用反向疫苗学和分子建模结合细胞增殖刺激方法从曼氏血吸虫中筛选多聚表位

The Use of Reverse Vaccinology and Molecular Modeling Associated with Cell Proliferation Stimulation Approach to Select Promiscuous Epitopes from Schistosoma mansoni.

作者信息

Oliveira Flávio M, Coelho Ivan E V, Lopes Marcelo D, Taranto Alex G, Junior Moacyr C, Santos Luciana L D, Villar José A P F, Fonseca Cristina T, Lopes Débora D O

机构信息

Laboratory of Molecular Biology, Universidade Federal de São João del Rei, Av. Sebastião Gonçalves Coelho, 400, Divinópolis, Minas Gerais, 35501-296, Brazil.

Laboratory of Molecular Modeling, Universidade Federal de São João del Rei, Av. Sebastião Gonçalves Coelho, 400, Divinópolis, Minas Gerais, 35501-296, Brazil.

出版信息

Appl Biochem Biotechnol. 2016 Jul;179(6):1023-40. doi: 10.1007/s12010-016-2048-1. Epub 2016 Mar 16.

Abstract

Schistosomiasis remains an important parasitic disease that affects millions of individuals worldwide. Despite the availability of chemotherapy, the occurrence of constant reinfection demonstrates the need for additional forms of intervention and the development of a vaccine represents a relevant strategy to control this disease. With the advent of genomics and bioinformatics, new strategies to search for vaccine targets have been proposed, as the reverse vaccinology. In this work, computational analyses of Schistosoma mansoni membrane proteins were performed to predict epitopes with high affinity for different human leukocyte antigen (HLA)-DRB1. Ten epitopes were selected and along with murine major histocompatibility complex (MHC) class II molecule had their three-dimensional structures optimized. Epitope interactions were evaluated against murine MHC class II molecule through molecular docking, electrostatic potential, and molecular volume. The epitope Sm141290 and Sm050890 stood out in most of the molecular modeling analyses. Cellular proliferation assay was performed to evaluate the ability of these epitopes to bind to murine MHC II molecules and stimulate CD4+ T cells showing that the same epitopes were able to significantly stimulate cell proliferation. This work showed an important strategy of peptide selection for epitope-based vaccine design, achieved by in silico analyses that can precede in vivo and in vitro experiments, avoiding excessive experimentation.

摘要

血吸虫病仍然是一种重要的寄生虫病,影响着全球数百万人。尽管有化疗方法,但持续再感染的发生表明需要其他形式的干预,而开发疫苗是控制这种疾病的一项相关策略。随着基因组学和生物信息学的出现,已经提出了寻找疫苗靶点的新策略,如反向疫苗学。在这项工作中,对曼氏血吸虫膜蛋白进行了计算分析,以预测对不同人类白细胞抗原(HLA)-DRB1具有高亲和力的表位。选择了10个表位,并对其与小鼠主要组织相容性复合体(MHC)II类分子的三维结构进行了优化。通过分子对接、静电势和分子体积评估表位与小鼠MHC II类分子的相互作用。表位Sm141290和Sm050890在大多数分子建模分析中表现突出。进行细胞增殖试验以评估这些表位与小鼠MHC II类分子结合并刺激CD4+ T细胞的能力,结果表明相同的表位能够显著刺激细胞增殖。这项工作展示了基于表位的疫苗设计中肽段选择的重要策略,通过计算机分析实现,这种分析可以先于体内和体外实验进行,避免过多的实验。

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