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季节性同域分布中的基因差异表达:不同生活史所涉及的机制

Differential gene expression in seasonal sympatry: mechanisms involved in diverging life histories.

作者信息

Fudickar Adam M, Peterson Mark P, Greives Timothy J, Atwell Jonathan W, Bridge Eli S, Ketterson Ellen D

机构信息

Department of Biology, Indiana University, Bloomington, IN 47405, USA

Department of Biology and Mathematics, Viterbo University, La Crosse, WI 54601, USA.

出版信息

Biol Lett. 2016 Mar;12(3):20160069. doi: 10.1098/rsbl.2016.0069.

DOI:10.1098/rsbl.2016.0069
PMID:26979563
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4843230/
Abstract

In an era of climate change, understanding the genetic and physiological mechanisms underlying flexibility in phenology and life history has gained greater importance. These mechanisms can be elucidated by comparing closely related populations that differ in key behavioural and physiological traits such as migration and timing of reproduction. We compared gene expression in two recently diverged dark-eyed Junco ( Junco hyemalis) subspecies that live in seasonal sympatry during winter and early spring, but that differ in behaviour and physiology, despite exposure to identical environmental cues. We identified 547 genes differentially expressed in blood and pectoral muscle. Genes involved in lipid transport and metabolism were highly expressed in migrant juncos, while genes involved in reproductive processes were highly expressed in resident breeders. Seasonal differences in gene expression in closely related populations residing in the same environment provide significant insights into mechanisms underlying variation in phenology and life history, and have potential implications for the role of seasonal timing differences in gene flow and reproductive isolation.

摘要

在气候变化的时代,了解物候和生活史灵活性背后的遗传和生理机制变得越发重要。通过比较在关键行为和生理特征(如迁徙和繁殖时间)上存在差异的近缘种群,可以阐明这些机制。我们比较了两个最近分化的暗眼灯草鹀(Junco hyemalis)亚种的基因表达情况,这两个亚种在冬季和早春季节同域分布,但尽管暴露于相同的环境线索下,它们在行为和生理上仍存在差异。我们鉴定出了547个在血液和胸肌中差异表达的基因。参与脂质运输和代谢的基因在迁徙型灯草鹀中高度表达,而参与生殖过程的基因在留居型繁殖鸟中高度表达。生活在相同环境中的近缘种群基因表达的季节性差异,为物候和生活史变异的潜在机制提供了重要见解,并对季节性时间差异在基因流动和生殖隔离中的作用具有潜在影响。

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本文引用的文献

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Reproductive Allochrony in Seasonally Sympatric Populations Maintained by Differential Response to Photoperiod: Implications for Population Divergence and Response to Climate Change.由对光周期的不同反应维持的季节性同域种群中的生殖异时性:对种群分化和气候变化响应的影响
Am Nat. 2016 Apr;187(4):436-46. doi: 10.1086/685296. Epub 2016 Feb 23.
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Polymorphism at the Clock gene predicts phenology of long-distance migration in birds.生物钟基因的多态性可预测鸟类长距离迁徙的物候。
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Stranded Whole Transcriptome RNA-Seq for All RNA Types.适用于所有RNA类型的链特异性全转录组RNA测序
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Phenotypic flexibility of skeletal muscle and heart masses and expression of myostatin and tolloid-like proteinases in migrating passerine birds.迁徙雀形目鸟类骨骼肌和心脏质量的表型灵活性以及肌肉生长抑制素和类类托洛依蛋白酶的表达
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Annual life history-dependent gene expression in the hypothalamus and liver of a migratory songbird: insights into the molecular regulation of seasonal metabolism.一种候鸟下丘脑和肝脏中与年度生活史相关的基因表达:对季节性代谢分子调控的见解
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Regulatory gene networks that shape the development of adaptive phenotypic plasticity in a cichlid fish.调控基因网络塑造慈鲷鱼适应性表型可塑性发育。
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Photoperiodic induction of pre-migratory phenotype in a migratory songbird: identification of metabolic proteins in flight muscles.候鸟迁徙前表型的光周期诱导:飞行肌肉中代谢蛋白的鉴定
J Comp Physiol B. 2014 Aug;184(6):741-51. doi: 10.1007/s00360-014-0827-y. Epub 2014 Apr 24.
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Variation in candidate genes CLOCK and ADCYAP1 does not consistently predict differences in migratory behavior in the songbird genus Junco.候选基因CLOCK和ADCYAP1的变异并不能始终如一地预测灯草鹀属鸣禽迁徙行为的差异。
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Daily expression of six clock genes in central and peripheral tissues of a night-migratory songbird: evidence for tissue-specific circadian timing.一种夜间迁徙鸣禽的中枢和外周组织中六个时钟基因的日常表达:组织特异性节律计时的证据。
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