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四个疟疾流行国家孕妇间日疟原虫分离株的微卫星基因分型

Microsatellite Genotyping of Plasmodium vivax Isolates from Pregnant Women in Four Malaria Endemic Countries.

作者信息

Menegon Michela, Bardají Azucena, Martínez-Espinosa Flor, Bôtto-Menezes Camila, Ome-Kaius Maria, Mueller Ivo, Betuela Inoni, Arévalo-Herrera Myriam, Kochar Swati, Kochar Sanjay K, Jaju Puneet, Hans Dhiraj, Chitnis Chetan, Padilla Norma, Castellanos María Eugenia, Ortiz Lucía, Sanz Sergi, Piqueras Mireia, Desai Meghna, Mayor Alfredo, Del Portillo Hernando, Menéndez Clara, Severini Carlo

机构信息

Department of Infectious, Parasitic and Immunomediated Diseases, Istituto Superiore di Sanità, Rome, Italy.

Barcelona Centre for International Health Research (CRESIB, Hospital Clínic-Universitat de Barcelona), Barcelona, Spain.

出版信息

PLoS One. 2016 Mar 24;11(3):e0152447. doi: 10.1371/journal.pone.0152447. eCollection 2016.

Abstract

Plasmodium vivax is the most widely distributed human parasite and the main cause of human malaria outside the African continent. However, the knowledge about the genetic variability of P. vivax is limited when compared to the information available for P. falciparum. We present the results of a study aimed at characterizing the genetic structure of P. vivax populations obtained from pregnant women from different malaria endemic settings. Between June 2008 and October 2011 nearly 2000 pregnant women were recruited during routine antenatal care at each site and followed up until delivery. A capillary blood sample from the study participants was collected for genotyping at different time points. Seven P. vivax microsatellite markers were used for genotypic characterization on a total of 229 P. vivax isolates obtained from Brazil, Colombia, India and Papua New Guinea. In each population, the number of alleles per locus, the expected heterozygosity and the levels of multilocus linkage disequilibrium were assessed. The extent of genetic differentiation among populations was also estimated. Six microsatellite loci on 137 P. falciparum isolates from three countries were screened for comparison. The mean value of expected heterozygosity per country ranged from 0.839 to 0.874 for P. vivax and from 0.578 to 0.758 for P. falciparum. P. vivax populations were more diverse than those of P. falciparum. In some of the studied countries, the diversity of P. vivax population was very high compared to the respective level of endemicity. The level of inter-population differentiation was moderate to high in all P. vivax and P. falciparum populations studied.

摘要

间日疟原虫是分布最广泛的人体寄生虫,也是非洲大陆以外地区人类疟疾的主要病因。然而,与恶性疟原虫的现有信息相比,关于间日疟原虫遗传变异性的知识有限。我们展示了一项旨在描述从不同疟疾流行地区的孕妇中获得的间日疟原虫种群遗传结构的研究结果。在2008年6月至2011年10月期间,在每个研究地点的常规产前检查中招募了近2000名孕妇,并随访至分娩。在不同时间点采集研究参与者的毛细血管血样进行基因分型。使用7个间日疟原虫微卫星标记对从巴西、哥伦比亚、印度和巴布亚新几内亚获得的总共229株间日疟原虫分离株进行基因型鉴定。在每个种群中,评估每个位点的等位基因数量、预期杂合度和多位点连锁不平衡水平。还估计了种群间的遗传分化程度。对来自三个国家的137株恶性疟原虫分离株的6个微卫星位点进行筛选以作比较。间日疟原虫每个国家的预期杂合度平均值在0.839至0.874之间,恶性疟原虫在0.578至0.758之间。间日疟原虫种群比恶性疟原虫种群更加多样化。在一些研究国家中,间日疟原虫种群的多样性与各自的流行程度相比非常高。在所研究的所有间日疟原虫和恶性疟原虫种群中,种群间分化水平为中度至高度。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2fd7/4807005/4b3dd1b7dafb/pone.0152447.g001.jpg

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