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北海细菌浮游生物与溶解有机物在分子水平上的短期动态关系

Short-Term Dynamics of North Sea Bacterioplankton-Dissolved Organic Matter Coherence on Molecular Level.

作者信息

Lucas Judith, Koester Irina, Wichels Antje, Niggemann Jutta, Dittmar Thorsten, Callies Ulrich, Wiltshire Karen H, Gerdts Gunnar

机构信息

Biological Station Helgoland, Shelf Sea Systems Ecology, Alfred-Wegener-Institute Helmholtz-Center for Polar and Marine Research Helgoland, Germany.

Research Group for Marine Geochemistry (ICBM-MPI Bridging Group), Institute for Chemistry and Biology of the Marine Environment, Carl von Ossietzky University Oldenburg Oldenburg, Germany.

出版信息

Front Microbiol. 2016 Mar 15;7:321. doi: 10.3389/fmicb.2016.00321. eCollection 2016.

DOI:10.3389/fmicb.2016.00321
PMID:27014241
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4791370/
Abstract

Remineralization and transformation of dissolved organic matter (DOM) by marine microbes shape the DOM composition and thus, have large impact on global carbon and nutrient cycling. However, information on bacterioplankton-DOM interactions on a molecular level is limited. We examined the variation of bacterial community composition (BCC) at Helgoland Roads (North Sea) in relation to variation of molecular DOM composition and various environmental parameters on short-time scales. Surface water samples were taken daily over a period of 20 days. Bacterial community and molecular DOM composition were assessed via 16S rRNA gene tag sequencing and ultrahigh resolution Fourier-transform ion cyclotron resonance mass spectrometry (FT-ICR-MS), respectively. Environmental conditions were driven by a coastal water influx during the first half of the sampling period and the onset of a summer phytoplankton bloom toward the end of the sampling period. These phenomena led to a distinct grouping of bacterial communities and DOM composition which was particularly influenced by total dissolved nitrogen (TDN) concentration, temperature, and salinity, as revealed by distance-based linear regression analyses. Bacterioplankton-DOM interaction was demonstrated in strong correlations between specific bacterial taxa and particular DOM molecules, thus, suggesting potential specialization on particular substrates. We propose that a combination of high resolution techniques, as used in this study, may provide substantial information on substrate generalists and specialists and thus, contribute to prediction of BCC variation.

摘要

海洋微生物对溶解有机物(DOM)的再矿化和转化塑造了DOM的组成,因此对全球碳和养分循环有重大影响。然而,关于细菌浮游生物与DOM在分子水平上相互作用的信息有限。我们研究了北海黑尔戈兰湾海域细菌群落组成(BCC)的变化,以及短期尺度下分子DOM组成和各种环境参数的变化。在20天的时间里每天采集地表水样本。分别通过16S rRNA基因标签测序和超高分辨率傅里叶变换离子回旋共振质谱(FT-ICR-MS)评估细菌群落和分子DOM组成。环境条件在前半个采样期受沿海水流入的驱动,在采样期接近尾声时受夏季浮游植物水华开始的影响。基于距离的线性回归分析表明,这些现象导致细菌群落和DOM组成明显分组,这尤其受到总溶解氮(TDN)浓度、温度和盐度的影响。特定细菌类群与特定DOM分子之间的强相关性证明了细菌浮游生物与DOM的相互作用,因此表明可能对特定底物具有专一性。我们认为,本研究中使用的高分辨率技术组合可能会提供有关底物通才和专才的大量信息,从而有助于预测BCC的变化。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a418/4791370/9a5ed5501228/fmicb-07-00321-g0007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a418/4791370/69cbbca920b1/fmicb-07-00321-g0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a418/4791370/3373aacc82cf/fmicb-07-00321-g0002.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a418/4791370/719f942e99a9/fmicb-07-00321-g0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a418/4791370/c1680a512909/fmicb-07-00321-g0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a418/4791370/9a5ed5501228/fmicb-07-00321-g0007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a418/4791370/69cbbca920b1/fmicb-07-00321-g0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a418/4791370/3373aacc82cf/fmicb-07-00321-g0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a418/4791370/6753fd14d53f/fmicb-07-00321-g0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a418/4791370/e0a4bd7cdb8d/fmicb-07-00321-g0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a418/4791370/719f942e99a9/fmicb-07-00321-g0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a418/4791370/c1680a512909/fmicb-07-00321-g0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a418/4791370/9a5ed5501228/fmicb-07-00321-g0007.jpg

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