Basant Nikita, Gupta Shikha, Singh Kunwar P
ETRC, Gomtinagar, Lucknow 226010, India.
Environmental Chemistry Division, CSIR-Indian Institute of Toxicology Research, Post Box 80, Mahatma Gandhi Marg, Lucknow 226001, India.
Regul Toxicol Pharmacol. 2016 Jun;77:282-91. doi: 10.1016/j.yrtph.2016.03.014. Epub 2016 Mar 25.
Experimental determination of the eye irritation potential (EIP) of chemicals is not only tedious, time and resource intensive, it involves cruelty to test animals. In this study, we have established a three-tier QSAR modeling strategy for estimating the EIP of chemicals for the use of pharmaceutical industry and regulatory agencies. Accordingly, a qualitative (binary classification: irritating, non-irritating), semi-quantitative (four-category classification), and quantitative (regression) QSAR models employing the SDT, DTF, and DTB methods were developed for predicting the EIP of chemicals in accordance with the OECD guidelines. Structural features of chemicals responsible for eye irritation were extracted and used in QSAR analysis. The external predictive power of the developed QSAR models were evaluated through the internal and external validation procedures recommended in QSAR literature. In test data, the two and four category classification QSAR models (DTF, DTB) rendered accuracy of >93%, while the regression QSAR models (DTF, DTB) yielded correlation (R(2)) of >0.92 between the measured and predicted EIPs. Values of various statistical validation coefficients derived for the test data were above their respective threshold limits (except rm(2) in DTF), thus put a high confidence in this analysis. The applicability domain of the constructed QSAR models were defined using the descriptors range and leverage approaches. The QSAR models in this study performed better than any of the previous studies. The results suggest that the developed QSAR models can reliably predict the EIP of diverse chemicals and can be useful tools for screening of candidate molecules in the drug development process.
化学物质眼刺激潜能(EIP)的实验测定不仅繁琐、耗费时间和资源,还涉及对实验动物的残忍行为。在本研究中,我们建立了一种三层定量构效关系(QSAR)建模策略,用于估算化学物质的EIP,以供制药行业和监管机构使用。据此,根据经合组织指南,采用SDT、DTF和DTB方法开发了定性(二元分类:刺激性、无刺激性)、半定量(四类分类)和定量(回归)QSAR模型,以预测化学物质的EIP。提取了导致眼刺激的化学物质的结构特征,并用于QSAR分析。通过QSAR文献中推荐的内部和外部验证程序,评估了所开发QSAR模型的外部预测能力。在测试数据中,两类和四类分类QSAR模型(DTF、DTB)的准确率>93%,而回归QSAR模型(DTF、DTB)在实测和预测的EIP之间的相关性(R(2))>0.92。为测试数据得出的各种统计验证系数的值均高于其各自的阈值限制(DTF中的rm(2)除外),因此对该分析有很高的信心。使用描述符范围和杠杆方法定义了所构建QSAR模型的适用域。本研究中的QSAR模型比以往任何研究都表现得更好。结果表明,所开发的QSAR模型能够可靠地预测各种化学物质的EIP,并且可以成为药物开发过程中筛选候选分子的有用工具。