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妊娠糖尿病患者的母体全基因组 DNA 甲基化谱分析显示,与匹配的健康妊娠相比,存在独特的与疾病相关的变化。

Maternal genome-wide DNA methylation profiling in gestational diabetes shows distinctive disease-associated changes relative to matched healthy pregnancies.

机构信息

a Institute for Science and Technology in Medicine , Keele University, Guy Hilton Research Center , Staffordshire , UK.

b Academic Unit of Obstetrics and Gynecology, University Hospital of North Midlands NHS Trust , Stoke-on-Trent, Staffordshire , UK.

出版信息

Epigenetics. 2018;13(2):122-128. doi: 10.1080/15592294.2016.1166321. Epub 2018 Jan 25.

Abstract

Several recent reports have described associations between gestational diabetes (GDM) and changes to the epigenomic landscape where the DNA samples were derived from either cord or placental sources. We employed genome-wide 450K array analysis to determine changes to the epigenome in a unique cohort of maternal blood DNA from 11 pregnant women prior to GDM development relative to matched controls. Hierarchical clustering segregated the samples into 2 distinct clusters comprising GDM and healthy pregnancies. Screening identified 100 CpGs with a mean β-value difference of ≥0.2 between cases and controls. Using stringent criteria, 5 CpGs (within COPS8, PIK3R5, HAAO, CCDC124, and C5orf34 genes) demonstrated potentials to be clinical biomarkers as revealed by differential methylation in 8 of 11 women who developed GDM relative to matched controls. We identified, for the first time, maternal methylation changes prior to the onset of GDM that may prove useful as biomarkers for early therapeutic intervention.

摘要

最近有几项报告描述了妊娠期糖尿病(GDM)与源自脐带或胎盘来源的 DNA 样本的表观基因组图谱变化之间的关联。我们采用全基因组 450K 阵列分析,在一个独特的队列中,从 11 名孕妇的母体血液 DNA 中确定了在 GDM 发展之前与匹配对照相比的表观基因组变化。层次聚类将样本分为 2 个不同的簇,包括 GDM 和健康妊娠。筛选出 100 个 CpG,其病例与对照组之间的平均 β 值差异≥0.2。使用严格的标准,5 个 CpG(位于 COPS8、PIK3R5、HAAO、CCDC124 和 C5orf34 基因内)在 11 名发展为 GDM 的女性中有 8 名相对于匹配对照显示出成为临床生物标志物的潜力,其甲基化差异。我们首次发现了 GDM 发生前母体甲基化的变化,这些变化可能作为早期治疗干预的生物标志物证明是有用的。

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