Kisly Ivan, Gulay Suna P, Mäeorg Uno, Dinman Jonathan D, Remme Jaanus, Tamm Tiina
Institute of Molecular and Cell Biology, University of Tartu, Tartu 51010, Estonia.
Department of Cell Biology and Molecular Genetics, University of Maryland, College Park, MD 20742, United States.
J Mol Biol. 2016 May 22;428(10 Pt B):2203-16. doi: 10.1016/j.jmb.2016.03.023. Epub 2016 Mar 30.
During translation, the two eukaryotic ribosomal subunits remain associated through 17 intersubunit bridges, five of which are eukaryote specific. These are mainly localized to the peripheral regions and are believed to stabilize the structure of the ribosome. The functional importance of these bridges remains largely unknown. Here, the essentiality of the eukaryote-specific bridge eB12 has been investigated. The main component of this bridge is ribosomal protein eL19 that is composed of an N-terminal globular domain, a middle region, and a long C-terminal α-helix. The analysis of deletion mutants demonstrated that the globular domain and middle region of eL19 are essential for cell viability, most likely functioning in ribosome assembly. The eB12 bridge, formed by contacts between the C-terminal α-helix of eL19 and 18S rRNA in concert with additional stabilizing interactions involving either eS7 or uS17, is dispensable for viability. Nevertheless, eL19 mutants impaired in eB12 bridge formation displayed slow growth phenotypes, altered sensitivity/resistance to translational inhibitors, and enhanced hyperosmotic stress tolerance. Biochemical analyses determined that the eB12 bridge contributes to the stability of ribosome subunit interactions in vitro. 60S subunits containing eL19 variants defective in eB12 bridge formation failed to form 80S ribosomes regardless of Mg(2+) concentration. The reassociation of 40S and mutant 60S subunits was markedly improved in the presence of deacetylated tRNA, emphasizing the importance of tRNAs during the subunit association. We propose that the eB12 bridge plays an important role in subunit joining and in optimizing ribosome functionality.
在翻译过程中,两个真核生物核糖体亚基通过17条亚基间桥相互关联,其中五条是真核生物特有的。这些桥主要位于周边区域,被认为可稳定核糖体的结构。这些桥的功能重要性在很大程度上仍不为人知。在此,对真核生物特有的桥eB12的必要性进行了研究。这座桥的主要成分是核糖体蛋白eL19,它由一个N端球状结构域、一个中间区域和一个长的C端α螺旋组成。对缺失突变体的分析表明,eL19的球状结构域和中间区域对细胞活力至关重要,很可能在核糖体组装中发挥作用。由eL19的C端α螺旋与18S rRNA之间的接触以及涉及eS7或uS17的额外稳定相互作用形成的eB12桥,对细胞活力来说是可有可无的。然而,在eB12桥形成中受损的eL19突变体表现出生长缓慢的表型、对翻译抑制剂的敏感性/抗性改变以及对高渗胁迫的耐受性增强。生化分析确定,eB12桥在体外有助于核糖体亚基相互作用的稳定性。无论Mg(2+)浓度如何,含有在eB12桥形成中存在缺陷的eL19变体的60S亚基都无法形成80S核糖体。在去乙酰化tRNA存在的情况下,40S和突变的60S亚基的重新结合得到了显著改善,这强调了tRNA在亚基结合过程中的重要性。我们提出,eB12桥在亚基结合和优化核糖体功能方面发挥着重要作用。