Belyy Alexander, Levanova Nadezhda, Tabakova Irina, Rospert Sabine, Belyi Yury
Department of Bacterial Infections, Gamaleya Research Center, Moscow, Russia; Faculty of Biology, Lomonosov Moscow State University, Moscow, Russia.
Department of Bacterial Infections, Gamaleya Research Center, Moscow, Russia.
mSphere. 2016 Feb 24;1(1). doi: 10.1128/mSphere.00109-15. eCollection 2016 Jan-Feb.
The eukaryotic ribosome consists of a small (40S) and a large (60S) subunit. Rps26 is one of the essential ribosomal proteins of the 40S subunit and is encoded by two almost identical genes, RPS26a and RPS26b. Previous studies demonstrated that Rps26 interacts with the 5' untranslated region of mRNA via the eukaryote-specific 62-YXXPKXYXK-70 (Y62-K70) motif. Those observations suggested that this peptide within Rps26 might play an important and specific role during translation initiation. By using alanine-scanning mutagenesis and engineered strains of the yeast Saccharomyces cerevisiae, we found that single amino acid substitutions within the Y62-K70 motif of Rps26 did not affect the in vivo function of the protein. In contrast, complete deletion of the Y62-K70 segment was lethal. The simultaneous replacement of five conserved residues within the Y62-K70 segment by alanines resulted in growth defects under stress conditions and produced distinct changes in polysome profiles that were indicative of the accumulation of free 60S subunits. Human Rps26 (Rps26-Hs), which displays significant homology with yeast Rps26, supported the growth of an S. cerevisiae Δrps26a Δrps26b strain. However, the Δrps26a Δrps26b double deletion strain expressing Rps26-Hs displayed substantial growth defects and an altered ratio of 40S/60S ribosomal subunits. The combined data strongly suggest that the eukaryote-specific motif within Rps26 does not play a specific role in translation initiation. Rather, the data indicate that Rps26 as a whole is necessary for proper assembly of the 40S subunit and the 80S ribosome in yeast. IMPORTANCE Rps26 is an essential protein of the eukaryotic small ribosomal subunit. Previous experiments demonstrated an interaction between the eukaryote-specific Y62-K70 segment of Rps26 and the 5' untranslated region of mRNA. The data suggested a specific role of the Y62-K70 motif during translation initiation. Here, we report that single-site substitutions within the Y62-K70 peptide did not affect the growth of engineered yeast strains, arguing against its having a critical role during translation initiation via specific interactions with the 5' untranslated region of mRNA molecules. Only the simultaneous replacement of five conserved residues within the Y62-K70 fragment or the replacement of the yeast protein with the human homolog resulted in growth defects and caused significant changes in polysome profiles. The results expand our knowledge of ribosomal protein function and suggest a role of Rps26 during ribosome assembly in yeast.
真核生物核糖体由一个小(40S)亚基和一个大(60S)亚基组成。Rps26是40S亚基的必需核糖体蛋白之一,由两个几乎相同的基因RPS26a和RPS26b编码。先前的研究表明,Rps26通过真核生物特有的62 - YXXPKXYXK - 70(Y62 - K70)基序与mRNA的5'非翻译区相互作用。这些观察结果表明,Rps26中的这个肽段可能在翻译起始过程中发挥重要且特定的作用。通过使用丙氨酸扫描诱变和酿酒酵母工程菌株,我们发现Rps26的Y62 - K70基序内的单个氨基酸替换并不影响该蛋白在体内的功能。相反,Y62 - K70片段的完全缺失是致死的。将Y62 - K70片段内的五个保守残基同时替换为丙氨酸会导致应激条件下的生长缺陷,并在多核糖体谱中产生明显变化,这表明游离60S亚基的积累。与酵母Rps26具有显著同源性的人Rps26(Rps26 - Hs)支持酿酒酵母Δrps26aΔrps26b菌株的生长。然而,表达Rps26 - Hs的Δrps26aΔrps26b双缺失菌株表现出严重的生长缺陷以及40S/60S核糖体亚基比例的改变。综合数据强烈表明,Rps26中的真核生物特有序列在翻译起始过程中不发挥特定作用。相反,数据表明Rps26作为一个整体对于酵母中40S亚基和80S核糖体的正确组装是必需的。重要性:Rps26是真核生物小核糖体亚基的必需蛋白。先前的实验表明Rps26的真核生物特有的Y62 - K70片段与mRNA的5'非翻译区之间存在相互作用。数据表明Y62 - K70基序在翻译起始过程中具有特定作用。在这里,我们报告Y62 - K70肽段内的单点替换并不影响工程酵母菌株的生长,这与它通过与mRNA分子的5'非翻译区特异性相互作用在翻译起始过程中起关键作用的观点相悖。只有同时替换Y62 - K70片段内的五个保守残基或用人同源物替换酵母蛋白才会导致生长缺陷并引起多核糖体谱的显著变化。这些结果扩展了我们对核糖体蛋白功能的认识,并表明Rps26在酵母核糖体组装过程中发挥作用。