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七种无尾两栖类动物的转录组比较分析揭示了两栖动物皮肤的功能与适应性。

Comparative transcriptome analyses of seven anurans reveal functions and adaptations of amphibian skin.

作者信息

Huang Li, Li Jun, Anboukaria Housseni, Luo Zhenhua, Zhao Mian, Wu Hua

机构信息

Institute of Evolution and Ecology, School of Life Sciences, Central China Normal University, 152 Luoyulu, Hongshan District, Wuhan 430079, China.

出版信息

Sci Rep. 2016 Apr 4;6:24069. doi: 10.1038/srep24069.

Abstract

Animal skin, which is the tissue that directly contacts the external surroundings, has evolved diverse functions to adapt to various environments. Amphibians represent the transitional taxon from aquatic to terrestrial life. Exploring the molecular basis of their skin function and adaptation is important to understand the survival and evolutionary mechanisms of vertebrates. However, comprehensive studies on the molecular mechanisms of skin functions in amphibians are scarce. In this study, we sequenced the skin transcriptomes of seven anurans belonging to three families and compared the similarities and differences in expressed genes and proteins. Unigenes and pathways related to basic biological processes and special functions, such as defense, immunity, and respiration, were enriched in functional annotations. A total of 108 antimicrobial peptides were identified. The highly expressed genes were similar in species of the same family but were different among families. Additionally, the positively selected orthologous groups were involved in biosynthesis, metabolism, immunity, and defense processes. This study is the first to generate extensive transcriptome data for the skin of seven anurans and provides unigenes and pathway candidates for further studies on amphibian skin function and adaptation.

摘要

动物皮肤是直接与外部环境接触的组织,已经进化出多种功能以适应各种环境。两栖动物是从水生生活过渡到陆生生活的分类群。探索其皮肤功能和适应性的分子基础对于理解脊椎动物的生存和进化机制很重要。然而,关于两栖动物皮肤功能分子机制的全面研究很少。在本研究中,我们对三个科的七种无尾两栖动物的皮肤转录组进行了测序,并比较了表达基因和蛋白质的异同。与基本生物学过程和特殊功能(如防御、免疫和呼吸)相关的单基因和途径在功能注释中得到富集。共鉴定出108种抗菌肽。高表达基因在同科物种中相似,但在不同科之间存在差异。此外,正选择的直系同源组参与生物合成、代谢、免疫和防御过程。本研究首次为七种无尾两栖动物的皮肤生成了大量转录组数据,并为进一步研究两栖动物皮肤功能和适应性提供了单基因和途径候选物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ab6a/4819189/0ea660ca7a8a/srep24069-f1.jpg

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