Svobodova Eliska, Kubikova Jana, Svoboda Petr
Institute of Molecular Genetics, Academy of Sciences of the Czech Republic, Videnska 1083, Prague 4, 142 20, Czech Republic.
Pflugers Arch. 2016 Jun;468(6):1089-102. doi: 10.1007/s00424-016-1817-6. Epub 2016 Apr 6.
MicroRNA (miRNA) and RNA interference (RNAi) pathways employ RNase III Dicer for the biogenesis of small RNAs guiding post-transcriptional repression. Requirements for Dicer activity differ in the two pathways. The biogenesis of miRNAs requires a single Dicer cleavage of a short hairpin precursor to produce a small RNA with a precisely defined sequence, while small RNAs in RNAi come from a processive cleavage of a long double-stranded RNA (dsRNA) into a pool of small RNAs with different sequences. While Dicer is generally conserved among eukaryotes, its substrate recognition, cleavage, and biological roles differ. In Metazoa, a single Dicer can function as a universal factor for RNAi and miRNA pathways or as a factor adapted specifically for one of the pathways. In this review, we focus on the structure, function, and evolution of mammalian Dicer. We discuss key structural features of Dicer and other factors defining Dicer substrate repertoire and biological functions in mammals in comparison with invertebrate models. The key for adaptation of Dicer for miRNA or RNAi pathways is the N-terminal helicase, a dynamically evolving Dicer domain. Its functionality differs between mammals and invertebrates: the mammalian Dicer is well adapted to produce miRNAs while its ability to support RNAi is limited.
微小RNA(miRNA)和RNA干扰(RNAi)途径利用核糖核酸酶III Dicer来生成指导转录后抑制的小RNA。Dicer活性在这两种途径中的要求有所不同。miRNA的生成需要Dicer对短发夹前体进行单次切割,以产生具有精确确定序列的小RNA,而RNAi中的小RNA则来自将长双链RNA(dsRNA)逐步切割成具有不同序列的小RNA池。虽然Dicer在真核生物中普遍保守,但其底物识别、切割和生物学作用有所不同。在后生动物中,单个Dicer可以作为RNAi和miRNA途径的通用因子,也可以作为专门适应其中一种途径的因子。在本综述中,我们重点关注哺乳动物Dicer的结构、功能和进化。我们将与无脊椎动物模型进行比较,讨论Dicer的关键结构特征以及其他定义哺乳动物中Dicer底物库和生物学功能的因子。Dicer适应miRNA或RNAi途径的关键在于N端解旋酶,这是一个动态进化的Dicer结构域。其功能在哺乳动物和无脊椎动物之间有所不同:哺乳动物Dicer非常适合生成miRNA,而其支持RNAi的能力有限。