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辅因子旁路变体揭示了一种控制细胞壁聚合酶活性的构象控制机制。

Cofactor bypass variants reveal a conformational control mechanism governing cell wall polymerase activity.

作者信息

Markovski Monica, Bohrhunter Jessica L, Lupoli Tania J, Uehara Tsuyoshi, Walker Suzanne, Kahne Daniel E, Bernhardt Thomas G

机构信息

Department of Microbiology and Immunobiology, Harvard Medical School, Boston, MA 02115;

Department of Chemistry and Chemical Biology, Harvard University, Cambridge, MA 02138;

出版信息

Proc Natl Acad Sci U S A. 2016 Apr 26;113(17):4788-93. doi: 10.1073/pnas.1524538113. Epub 2016 Apr 11.

Abstract

To fortify their cytoplasmic membrane and protect it from osmotic rupture, most bacteria surround themselves with a peptidoglycan (PG) exoskeleton synthesized by the penicillin-binding proteins (PBPs). As their name implies, these proteins are the targets of penicillin and related antibiotics. We and others have shown that the PG synthases PBP1b and PBP1a of Escherichia coli require the outer membrane lipoproteins LpoA and LpoB, respectively, for their in vivo function. Although it has been demonstrated that LpoB activates the PG polymerization activity of PBP1b in vitro, the mechanism of activation and its physiological relevance have remained unclear. We therefore selected for variants of PBP1b (PBP1b*) that bypass the LpoB requirement for in vivo function, reasoning that they would shed light on LpoB function and its activation mechanism. Several of these PBP1b variants were isolated and displayed elevated polymerization activity in vitro, indicating that the activation of glycan polymer growth is indeed one of the relevant functions of LpoB in vivo. Moreover, the location of amino acid substitutions causing the bypass phenotype on the PBP1b structure support a model in which polymerization activation proceeds via the induction of a conformational change in PBP1b initiated by LpoB binding to its UB2H domain, followed by its transmission to the glycosyl transferase active site. Finally, phenotypic analysis of strains carrying a PBP1b* variant revealed that the PBP1b-LpoB complex is most likely not providing an important physical link between the inner and outer membranes at the division site, as has been previously proposed.

摘要

为了强化其细胞质膜并保护其免受渗透压破裂,大多数细菌会被由青霉素结合蛋白(PBPs)合成的肽聚糖(PG)外骨骼所包围。顾名思义,这些蛋白质是青霉素及相关抗生素的作用靶点。我们和其他人已经表明,大肠杆菌的PG合成酶PBP1b和PBP1a在体内发挥功能分别需要外膜脂蛋白LpoA和LpoB。尽管已经证明LpoB在体外可激活PBP1b的PG聚合活性,但其激活机制及其生理相关性仍不清楚。因此,我们筛选出了能够绕过LpoB在体内功能所需的PBP1b变体(PBP1b*),认为它们将有助于阐明LpoB的功能及其激活机制。分离出了几种这样的PBP1b变体,它们在体外表现出更高的聚合活性,这表明聚糖聚合物生长的激活确实是LpoB在体内的相关功能之一。此外,导致绕过表型的氨基酸取代在PBP1b结构上的位置支持了一种模型,即聚合激活是通过LpoB与其UB2H结构域结合引发的PBP1b构象变化的诱导,随后传递到糖基转移酶活性位点来进行的。最后,对携带PBP1b*变体的菌株进行的表型分析表明,PBP1b-LpoB复合物很可能不像先前提出的那样在分裂位点在内膜和外膜之间提供重要的物理连接。

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