Hernández Damir, Casane Didier, Chevalier-Monteagudo Pedro, Bernatchez Louis, García-Machado Erik
Centro de Investigaciones Marinas, Universidad de La Habana, Calle 16, No. 114 entre 1ra y 3ra, Miramar, Playa, La Habana, 11300, Cuba.
Laboratoire Evolution, Génomes, Comportement, Ecologie, CNRS, Université Paris-Sud, UMR 9191, IRD UMR 247, Gif-sur-Yvette, France.
PLoS One. 2016 Apr 15;11(4):e0153545. doi: 10.1371/journal.pone.0153545. eCollection 2016.
Consistent with the limited dispersal capacity of most troglobitic animals, almost all Lucifuga cavefish species have very narrow geographic distribution in Cuba. However, one species, L. dentata, has a wide but disjointed distribution over 300 km in the west of the island. In order to estimate the relative role of vicariance and dispersal in the unexpected L. dentata distribution, we obtained partial sequences of the mitochondrial DNA (mtDNA) cytochrome b (cytb) gene and control region (CR), and then applied Approximate Bayesian Computation (ABC), based on the identification of five genetic and geographic congruent groups of populations. The process that best explains the distribution of genetic diversity in this species is sequential range expansion from east Matanzas to the western Pinar del Río provinces, followed by isolation of groups of populations. We found relative high haplotype diversity and low nucleotide diversity in all but the Havana group, which has high values for both diversity parameters, suggesting that this group has been demographically stable over time. For two groups of populations (Cayuco and Bolondrón), the mismatch distribution analyses suggests past demographic expansion. In the case of the Cayuco region, the star like relationships of haplotypes in the network suggests a recent founding event, congruent with other evidence indicating that this is the most recently colonized region. Over all, the results suggest that a combination of habitat availability, temporal interconnections, and possibly the biological properties of this species, may have enabled its dispersal and range expansion compared to other species of the genus, which are more geographically restricted.
与大多数洞穴动物有限的扩散能力一致,几乎所有古巴盲鳉属洞穴鱼类的地理分布都非常狭窄。然而,有一种物种,即齿盲鳉,在该岛西部有广泛但不连续的分布,跨度超过300公里。为了估计隔离分化和扩散在齿盲鳉意外分布中的相对作用,我们获得了线粒体DNA(mtDNA)细胞色素b(cytb)基因和控制区(CR)的部分序列,然后基于对五个遗传和地理一致的种群组的识别,应用近似贝叶斯计算(ABC)。最能解释该物种遗传多样性分布的过程是从马坦萨斯东部到比那尔德里奥省西部的连续范围扩张,随后种群组隔离。我们发现,除哈瓦那种群组外,其他种群组的单倍型多样性相对较高,核苷酸多样性较低,而哈瓦那种群组的这两个多样性参数值都很高,这表明该种群组在一段时间内人口统计学上一直很稳定。对于两组种群(卡尤科和博隆德龙),失配分布分析表明过去存在人口扩张。就卡尤科地区而言,网络中星状的单倍型关系表明是最近的奠基事件,这与其他证据一致,表明这是最近才殖民的地区。总体而言,结果表明,与该属其他地理分布更受限制的物种相比,栖息地可用性、时间上的相互联系以及该物种可能的生物学特性的综合作用,可能使其得以扩散和范围扩张。