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在秀丽隐杆线虫中,多聚腺苷酸结合蛋白是微小RNA介导的沉默所必需的,并且能够促进靶标去腺苷酸化。

Poly(A)-binding proteins are required for microRNA-mediated silencing and to promote target deadenylation in C. elegans.

作者信息

Flamand Mathieu N, Wu Edlyn, Vashisht Ajay, Jannot Guillaume, Keiper Brett D, Simard Martin J, Wohlschlegel James, Duchaine Thomas F

机构信息

Department of Biochemistry, McGill University, Montreal, QC H3A 1A3, Canada Goodman Cancer Research Center, McGill University, Montreal, QC H3A 1A3, Canada.

Department of Biochemistry, McGill University, Montreal, QC H3A 1A3, Canada Division of Experimental Medicine & Goodman Cancer Research Center, McGill University, Montreal, QC H3A 1A3, Canada.

出版信息

Nucleic Acids Res. 2016 Jul 8;44(12):5924-35. doi: 10.1093/nar/gkw276. Epub 2016 Apr 19.

Abstract

Cytoplasmic poly(A)-binding proteins (PABPs) link mRNA 3' termini to translation initiation factors, but they also play key roles in mRNA regulation and decay. Reports from mice, zebrafish and Drosophila further involved PABPs in microRNA (miRNA)-mediated silencing, but through seemingly distinct mechanisms. Here, we implicate the two Caenorhabditis elegans PABPs (PAB-1 and PAB-2) in miRNA-mediated silencing, and elucidate their mechanisms of action using concerted genetics, protein interaction analyses, and cell-free assays. We find that C. elegans PABPs are required for miRNA-mediated silencing in embryonic and larval developmental stages, where they act through a multi-faceted mechanism. Depletion of PAB-1 and PAB-2 results in loss of both poly(A)-dependent and -independent translational silencing. PABPs accelerate miRNA-mediated deadenylation, but this contribution can be modulated by 3'UTR sequences. While greater distances with the poly(A) tail exacerbate dependency on PABP for deadenylation, more potent miRNA-binding sites partially suppress this effect. Our results refine the roles of PABPs in miRNA-mediated silencing and support a model wherein they enable miRNA-binding sites by looping the 3'UTR poly(A) tail to the bound miRISC and deadenylase.

摘要

细胞质聚腺苷酸结合蛋白(PABPs)将mRNA的3'末端与翻译起始因子相连,但它们在mRNA的调控和降解中也发挥着关键作用。来自小鼠、斑马鱼和果蝇的报告进一步表明PABPs参与了微小RNA(miRNA)介导的沉默,但机制似乎不同。在这里,我们发现秀丽隐杆线虫的两种PABPs(PAB-1和PAB-2)参与了miRNA介导的沉默,并通过协同遗传学、蛋白质相互作用分析和无细胞分析阐明了它们的作用机制。我们发现秀丽隐杆线虫的PABPs在胚胎和幼虫发育阶段的miRNA介导的沉默中是必需的,它们通过多方面的机制发挥作用。PAB-1和PAB-2的缺失导致聚腺苷酸依赖性和非依赖性翻译沉默的丧失。PABPs加速了miRNA介导的去腺苷酸化,但这种作用可以被3'非翻译区(3'UTR)序列调节。虽然与聚腺苷酸尾的距离越远,去腺苷酸化对PABP的依赖性越强,但更强的miRNA结合位点会部分抑制这种效应。我们的结果细化了PABPs在miRNA介导的沉默中的作用,并支持了一个模型,即它们通过将3'UTR聚腺苷酸尾环化到结合的miRISC和去腺苷酸酶上,从而使miRNA结合位点得以发挥作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1b9d/4937315/4d15fc52d19f/gkw276fig1.jpg

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