Goodman Cancer Research Center, McGill University, Montréal H3G 1Y6, Canada.
Department of Biochemistry, McGill University, Montréal H3G 1Y6, Canada.
Nucleic Acids Res. 2021 May 21;49(9):4803-4815. doi: 10.1093/nar/gkab162.
microRNA (miRNA)-mediated gene silencing is enacted through the recruitment of effector proteins that direct translational repression or degradation of mRNA targets, but the relative importance of their activities for animal development remains unknown. Our concerted proteomic surveys identified the uncharacterized GYF-domain encoding protein GYF-1 and its direct interaction with IFE-4, the ortholog of the mammalian translation repressor 4EHP, as key miRNA effector proteins in Caenorhabditis elegans. Recruitment of GYF-1 protein to mRNA reporters in vitro or in vivo leads to potent translation repression without affecting the poly(A) tail or impinging on mRNA stability. Loss of gyf-1 is synthetic lethal with hypomorphic alleles of embryonic miR-35-42 and larval (L4) let-7 miRNAs, which is phenocopied through engineered mutations in gyf-1 that abolish interaction with IFE-4. GYF-1/4EHP function is cascade-specific, as loss of gyf-1 had no noticeable impact on the functions of other miRNAs, including lin-4 and lsy-6. Overall, our findings reveal the first direct effector of miRNA-mediated translational repression in C. elegans and its physiological importance for the function of several, but likely not all miRNAs.
microRNA (miRNA)介导的基因沉默是通过募集效应蛋白来实现的,这些效应蛋白可以指导 mRNA 靶标的翻译抑制或降解,但它们的活性对动物发育的相对重要性尚不清楚。我们协同的蛋白质组学调查鉴定了未被表征的 GYF 结构域编码蛋白 GYF-1 及其与 IFE-4 的直接相互作用,IFE-4 是哺乳动物翻译抑制剂 4EHP 的同源物,是秀丽隐杆线虫中关键的 miRNA 效应蛋白。GYF-1 蛋白在体外或体内被招募到 mRNA 报告基因上,会导致强烈的翻译抑制,而不会影响 poly(A) 尾巴或影响 mRNA 稳定性。gyf-1 的缺失与胚胎 miR-35-42 和幼虫 (L4) let-7 miRNA 的功能缺陷等位基因是合成致死的,通过在 gyf-1 中引入工程突变来消除与 IFE-4 的相互作用,可以模拟这种表型。GYF-1/4EHP 功能是级联特异性的,因为 gyf-1 的缺失对其他 miRNA 的功能几乎没有明显影响,包括 lin-4 和 lsy-6。总的来说,我们的发现揭示了 miRNA 介导的翻译抑制在秀丽隐杆线虫中的第一个直接效应物及其对几个 miRNA(而不是所有 miRNA)功能的生理重要性。