Suppr超能文献

虹鳟下丘脑-垂体-卵巢-肝脏轴的计算模型

A Computational Model of the Rainbow Trout Hypothalamus-Pituitary-Ovary-Liver Axis.

作者信息

Gillies Kendall, Krone Stephen M, Nagler James J, Schultz Irvin R

机构信息

Battelle, Pacific Northwest National Laboratory, Marine Sciences Laboratory, Sequim, Washington, United States of America.

University of Idaho, Department of Mathematics, Moscow, Idaho, United States of America.

出版信息

PLoS Comput Biol. 2016 Apr 20;12(4):e1004874. doi: 10.1371/journal.pcbi.1004874. eCollection 2016 Apr.

Abstract

Reproduction in fishes and other vertebrates represents the timely coordination of many endocrine factors that culminate in the production of mature, viable gametes. In recent years there has been rapid growth in understanding fish reproductive biology, which has been motivated in part by recognition of the potential effects that climate change, habitat destruction and contaminant exposure can have on natural and cultured fish populations. New approaches to understanding the impacts of these stressors are being developed that require a systems biology approach with more biologically accurate and detailed mathematical models. We have developed a multi-scale mathematical model of the female rainbow trout hypothalamus-pituitary-ovary-liver axis to use as a tool to help understand the functioning of the system and for extrapolation of laboratory findings of stressor impacts on specific components of the axis. The model describes the essential endocrine components of the female rainbow trout reproductive axis. The model also describes the stage specific growth of maturing oocytes within the ovary and permits the presence of sub-populations of oocytes at different stages of development. Model formulation and parametrization was largely based on previously published in vivo and in vitro data in rainbow trout and new data on the synthesis of gonadotropins in the pituitary. Model predictions were validated against several previously published data sets for annual changes in gonadotropins and estradiol in rainbow trout. Estimates of select model parameters can be obtained from in vitro assays using either quantitative (direct estimation of rate constants) or qualitative (relative change from control values) approaches. This is an important aspect of mathematical models as in vitro, cell-based assays are expected to provide the bulk of experimental data for future risk assessments and will require quantitative physiological models to extrapolate across biological scales.

摘要

鱼类和其他脊椎动物的繁殖体现了多种内分泌因素的适时协调,最终产生成熟、有活力的配子。近年来,对鱼类生殖生物学的认识迅速发展,部分原因是认识到气候变化、栖息地破坏和污染物暴露可能对自然和养殖鱼类种群产生潜在影响。正在开发理解这些应激源影响的新方法,这需要采用系统生物学方法以及更具生物学准确性和详细性的数学模型。我们构建了雌性虹鳟下丘脑 - 垂体 - 卵巢 - 肝脏轴的多尺度数学模型,用作帮助理解该系统功能的工具,并用于推断应激源对轴的特定组成部分影响的实验室研究结果。该模型描述了雌性虹鳟生殖轴的基本内分泌成分。该模型还描述了卵巢内成熟卵母细胞的阶段特异性生长,并允许存在处于不同发育阶段的卵母细胞亚群。模型的构建和参数化主要基于先前发表的虹鳟体内和体外数据以及垂体中促性腺激素合成的新数据。针对先前发表的几个虹鳟促性腺激素和雌二醇年度变化数据集对模型预测进行了验证。可以使用定量(直接估计速率常数)或定性(相对于对照值的相对变化)方法从体外测定中获得选定模型参数的估计值。这是数学模型的一个重要方面,因为体外基于细胞的测定有望为未来的风险评估提供大量实验数据,并且将需要定量生理模型在不同生物尺度上进行推断。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2bee/4838294/aedabcb6e0f7/pcbi.1004874.g001.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验