Suppr超能文献

基于卵黄发生记忆效应的转录印迹动态模型。

A dynamic model of transcriptional imprinting derived from the vitellogenesis memory effect.

机构信息

UMR6026 Interactions Cellulaires et Moléculaires IFR140 GFAS Irset, Université de Rennes1, Rennes, France.

出版信息

Biophys J. 2011 Oct 5;101(7):1557-68. doi: 10.1016/j.bpj.2011.07.004.

Abstract

Transcriptional memory of transient signals can be imprinted on living systems and influence their reactivity to repeated stimulations. Although they are classically ascribed to structural chromatin rearrangements in eukaryotes, such behaviors can also rely on dynamic memory circuits with sustained self-amplification loops. However, these phenomena are either of finite duration, or conversely associated to sustained phenotypic changes. A mechanism is proposed, in which only the responsiveness of the target gene is durably reset at a higher level after primary stimulation, using the celebrated but still puzzling vitellogenesis memory effect. The basic ingredients of this system are: 1), a positive autoregulation of the estrogen receptor α gene; 2), a strongly cooperative action of the estradiol receptor on vitellogenin expression; and 3), a variant isoform of the estradiol receptor with two autonomous transcription-activating modules, one of which is signal-independent and the other, signal-dependent. Realistic quantification supports the possibility of a multistationary situation in which ligand-independent activity is unable by itself to prime the amplification loop, but can click the system over a memory threshold after a primary stimulation. This ratchet transcriptional mechanism can have developmental and ecotoxicological importance and explain lifelong imprinting of past exposures without apparent phenotypic changes before restimulation and without need for persistent chromatin modifications.

摘要

瞬时信号的转录记忆可以被印刻在活系统中,并影响它们对重复刺激的反应性。尽管它们通常归因于真核生物中结构性染色质重排,但这些行为也可以依赖于具有持续自我放大环的动态记忆电路。然而,这些现象要么持续时间有限,要么相反与持续的表型变化有关。提出了一种机制,即在初级刺激后,仅使用著名但仍然令人困惑的卵黄蛋白发生记忆效应,使靶基因的反应性持久地在更高水平上重新设置,从而实现这一机制。该系统的基本成分包括:1)雌激素受体α基因的正自调控;2)雌二醇受体对卵黄蛋白表达的强烈协同作用;以及 3)雌二醇受体的变体同工型,其具有两个自主转录激活模块,其中一个是信号独立的,另一个是信号依赖的。现实的量化支持了多定态情况的可能性,即配体独立的活性本身无法启动放大环,但可以在初级刺激后通过记忆阈值点击系统。这种棘轮转录机制可能具有发育和生态毒理学的重要性,并可以解释在没有明显表型变化的情况下,终生印记过去暴露的情况,而无需持续的染色质修饰。

相似文献

1
A dynamic model of transcriptional imprinting derived from the vitellogenesis memory effect.
Biophys J. 2011 Oct 5;101(7):1557-68. doi: 10.1016/j.bpj.2011.07.004.
2
Regulation of expression of Xenopus vitellogenin genes.
Dev Biol (N Y 1985). 1988;5:241-65. doi: 10.1007/978-1-4615-6817-9_9.
5
Temporal expression of hepatic estrogen receptor 1, vitellogenin1 and vitellogenin2 in European silver eels.
Gen Comp Endocrinol. 2010 Mar 1;166(1):1-11. doi: 10.1016/j.ygcen.2009.09.006. Epub 2009 Sep 18.
8
Hepatic expression profiles of three subtypes of vitellogenin and estrogen receptor during vitellogenesis in cultured female yellowtail.
Gen Comp Endocrinol. 2020 Dec 1;299:113612. doi: 10.1016/j.ygcen.2020.113612. Epub 2020 Sep 17.

引用本文的文献

1
A Computational Model of the Rainbow Trout Hypothalamus-Pituitary-Ovary-Liver Axis.
PLoS Comput Biol. 2016 Apr 20;12(4):e1004874. doi: 10.1371/journal.pcbi.1004874. eCollection 2016 Apr.
3
Epigenetic memories: structural marks or active circuits?
Cell Mol Life Sci. 2012 Jul;69(13):2189-203. doi: 10.1007/s00018-012-0923-7. Epub 2012 Feb 14.

本文引用的文献

1
Control of gene expression by modulated self-assembly.
Nucleic Acids Res. 2011 Sep 1;39(16):6854-63. doi: 10.1093/nar/gkr272. Epub 2011 May 20.
2
Tuning and controlling gene expression noise in synthetic gene networks.
Nucleic Acids Res. 2010 May;38(8):2712-26. doi: 10.1093/nar/gkq091. Epub 2010 Mar 8.
3
Transcriptional memory: staying in the loop.
Curr Biol. 2010 Jan 12;20(1):R20-1. doi: 10.1016/j.cub.2009.11.013.
4
Nuclear run-on assay.
Cold Spring Harb Protoc. 2009 Nov;2009(11):pdb.prot5329. doi: 10.1101/pdb.prot5329.
5
How transcription factors can adjust the gene expression floodgates.
Prog Biophys Mol Biol. 2010 Jan;102(1):16-37. doi: 10.1016/j.pbiomolbio.2009.12.007. Epub 2009 Dec 16.
6
Activation of the unliganded estrogen receptor by prolactin in breast cancer cells.
Oncogene. 2009 Mar 12;28(10):1298-308. doi: 10.1038/onc.2008.473. Epub 2009 Jan 26.
7
In vivo dynamics of RNA polymerase II transcription.
Nat Struct Mol Biol. 2007 Sep;14(9):796-806. doi: 10.1038/nsmb1280. Epub 2007 Aug 5.
8
Noise in gene expression determines cell fate in Bacillus subtilis.
Science. 2007 Jul 27;317(5837):526-9. doi: 10.1126/science.1140818. Epub 2007 Jun 14.
9
ENZYME INDUCTION AS AN ALL-OR-NONE PHENOMENON.
Proc Natl Acad Sci U S A. 1957 Jul 15;43(7):553-66. doi: 10.1073/pnas.43.7.553.
10
Discovery of estrogen receptor alpha target genes and response elements in breast tumor cells.
Genome Biol. 2004;5(9):R66. doi: 10.1186/gb-2004-5-9-r66. Epub 2004 Aug 12.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验