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Nuclear run-on assay.核转录分析
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Discovery of estrogen receptor alpha target genes and response elements in breast tumor cells.乳腺肿瘤细胞中雌激素受体α靶基因及反应元件的发现。
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基于卵黄发生记忆效应的转录印迹动态模型。

A dynamic model of transcriptional imprinting derived from the vitellogenesis memory effect.

机构信息

UMR6026 Interactions Cellulaires et Moléculaires IFR140 GFAS Irset, Université de Rennes1, Rennes, France.

出版信息

Biophys J. 2011 Oct 5;101(7):1557-68. doi: 10.1016/j.bpj.2011.07.004.

DOI:10.1016/j.bpj.2011.07.004
PMID:21961581
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3183801/
Abstract

Transcriptional memory of transient signals can be imprinted on living systems and influence their reactivity to repeated stimulations. Although they are classically ascribed to structural chromatin rearrangements in eukaryotes, such behaviors can also rely on dynamic memory circuits with sustained self-amplification loops. However, these phenomena are either of finite duration, or conversely associated to sustained phenotypic changes. A mechanism is proposed, in which only the responsiveness of the target gene is durably reset at a higher level after primary stimulation, using the celebrated but still puzzling vitellogenesis memory effect. The basic ingredients of this system are: 1), a positive autoregulation of the estrogen receptor α gene; 2), a strongly cooperative action of the estradiol receptor on vitellogenin expression; and 3), a variant isoform of the estradiol receptor with two autonomous transcription-activating modules, one of which is signal-independent and the other, signal-dependent. Realistic quantification supports the possibility of a multistationary situation in which ligand-independent activity is unable by itself to prime the amplification loop, but can click the system over a memory threshold after a primary stimulation. This ratchet transcriptional mechanism can have developmental and ecotoxicological importance and explain lifelong imprinting of past exposures without apparent phenotypic changes before restimulation and without need for persistent chromatin modifications.

摘要

瞬时信号的转录记忆可以被印刻在活系统中,并影响它们对重复刺激的反应性。尽管它们通常归因于真核生物中结构性染色质重排,但这些行为也可以依赖于具有持续自我放大环的动态记忆电路。然而,这些现象要么持续时间有限,要么相反与持续的表型变化有关。提出了一种机制,即在初级刺激后,仅使用著名但仍然令人困惑的卵黄蛋白发生记忆效应,使靶基因的反应性持久地在更高水平上重新设置,从而实现这一机制。该系统的基本成分包括:1)雌激素受体α基因的正自调控;2)雌二醇受体对卵黄蛋白表达的强烈协同作用;以及 3)雌二醇受体的变体同工型,其具有两个自主转录激活模块,其中一个是信号独立的,另一个是信号依赖的。现实的量化支持了多定态情况的可能性,即配体独立的活性本身无法启动放大环,但可以在初级刺激后通过记忆阈值点击系统。这种棘轮转录机制可能具有发育和生态毒理学的重要性,并可以解释在没有明显表型变化的情况下,终生印记过去暴露的情况,而无需持续的染色质修饰。