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技术说明:利用内转录间隔区进行奶牛瘤胃酵母鉴定。

Technical note: use of internal transcribed spacer for ruminal yeast identification in dairy cows.

机构信息

1Departamento de Ciencias Animales, Facultad de Agronomía e Ingeniería Forestal,Pontificia Universidad Católica de Chile,Santiago,Casilla 306,C.P. 6904411,Chile.

2Laboratorio de Biotecnología,Instituto de Nutrición y Tecnología de los Alimentos (INTA),Universidad de Chile,Santiago,C.P. 7810000,Chile.

出版信息

Animal. 2016 Dec;10(12):1949-1954. doi: 10.1017/S1751731116000768. Epub 2016 May 2.

Abstract

Molecular techniques are important tools for microbiological studies in different habitats, and the internal transcribed spacer (ITS) has been proved to be useful for analyzing fungal diversity. The aim of this study was to use the ITS region to generate ruminal yeast profile and to identify ruminal yeast. DNA from ruminal digesta was extracted to amplify the ribosomal ITS region. The profile from the PCR products was visualized and the excised bands from the profile were identified as the genera Millerozyma, Pichia, Rhizomucor and Hyphopichia. Overall, the ITS resulted to be a simple, fast and sensitive approach that allowed profiling and identification of ruminal yeast that have not been previously described (Millerozyma and Hyphopichia) in the rumen microbial community.

摘要

分子技术是研究不同生境中微生物的重要工具,内部转录间隔区(ITS)已被证明可用于分析真菌多样性。本研究旨在利用 ITS 区生成瘤胃酵母图谱并鉴定瘤胃酵母。从瘤胃液中提取 DNA 以扩增核糖体 ITS 区。从 PCR 产物中可视化图谱,并从图谱中切下的条带鉴定为属米曲霉、毕赤酵母、根毛霉和假丝酵母。总体而言,ITS 是一种简单、快速和敏感的方法,可对以前未在瘤胃微生物群落中描述过的瘤胃酵母(米曲霉和假丝酵母)进行分析和鉴定。

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