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复杂介质与酶动力学。

Complex Media and Enzymatic Kinetics.

机构信息

Dipartimento di Chimica "G. Ciamician", Università di Bologna , V. F. Selmi 2, 40126, Bologna, Italy.

Department of Chemistry, University of Ioannina , 45110 Ioannina, Greece.

出版信息

Anal Chem. 2016 Jun 7;88(11):5790-6. doi: 10.1021/acs.analchem.6b00343. Epub 2016 May 19.

DOI:10.1021/acs.analchem.6b00343
PMID:27149003
Abstract

Enzymatic reactions in complex environments often take place with concentrations of enzyme comparable to that of substrate molecules. Two such cases occur when an enzyme is used to detect low concentrations of substrate/analyte or inside a living cell. Such concentrations do not agree with standard in vitro conditions, aimed at satisfying one of the founding hypotheses of the Michaelis-Menten reaction scheme, MM. It would be desirable to generalize the classical approach and show its applicability to complex systems. A permeable micrometrically structured hydrogel matrix was fabricated by protein cross-linking. Glucose oxidase enzyme (GOx) was embedded in the matrix and used as a prototypical system. The concentration of H2O2 was monitored in time and fitted by an accurate solution of the enzymatic kinetic scheme, which is expressed in terms of simple functions. The approach can also find applications in digital microfluidics and in systems biology where the kinetics response in the linear regimes often employed must be replaced.

摘要

在复杂环境中,酶促反应通常在与底物分子浓度相当的酶浓度下进行。当酶用于检测低浓度的底物/分析物或在活细胞内时,就会出现两种情况。这些浓度与旨在满足米氏-门坦反应方案(MM)的一个基本假设的标准体外条件不一致。将经典方法推广并展示其在复杂系统中的适用性是可取的。通过蛋白质交联制造了可渗透的微尺度结构化水凝胶基质。将葡萄糖氧化酶(GOx)嵌入基质中,并用作原型系统。监测过氧化氢的浓度随时间的变化,并通过酶动力学方案的精确解进行拟合,该方案用简单的函数表示。该方法还可以在数字微流控和系统生物学中找到应用,其中经常使用的线性区域的动力学响应必须被替换。

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