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基于细胞色素b线粒体基因推断印度水域双斑鮠的群体遗传结构和地理分化

Population genetic structure and geographic differentiation in butter catfish, Ompok bimaculatus, from Indian waters inferred by cytochrome b mitochondrial gene.

作者信息

Kumar Ravindra, Pandey Brijesh Kumar, Sarkar Uttam Kumar, Nagpure Naresh Sahebrao, Baisvar Vishwamitra Singh, Agnihotri Praveen, Awasthi Abhishek, Mishra Abha, Kumar Narendra

机构信息

a ICAR - National Bureau of Fish Genetic Resources , Lucknow , Uttar Pradesh , India.

b Babasaheb Bhimrao Ambedkar University (A Central University) , Vidya Vihar , Lucknow , Uttar Pradesh , India.

出版信息

Mitochondrial DNA A DNA Mapp Seq Anal. 2017 May;28(3):442-450. doi: 10.3109/19401736.2015.1137898. Epub 2016 Feb 9.

DOI:10.3109/19401736.2015.1137898
PMID:27159686
Abstract

Documentation of genetic differentiation among the populations of a species can provide useful information that has roles in conservation, breeding, and management plans. In the present study, we examined the genetic structure and phylogenetic relationships among the 149 individuals of Ompok bimaculatus belonging to 24 populations, collected from Indian waters, using cytochrome b gene. The combined analyses of data suggested that the Indian O. bimaculatus consist of three distinct mtDNA lineages with star-like haplotypes network, which exhibited high genetic variation and haplotypic diversity. Analysis of molecular variance indicated that most of the observed genetic variation was found among the populations suggesting restricted gene flow. Long-term interruption of gene flow was also evidenced by high overall Fst values (0.82367) that could be favored by the discontinuous distributions of the lineages.

摘要

一个物种不同种群间遗传分化的记录能够提供有用信息,这些信息在保护、育种及管理计划中发挥着作用。在本研究中,我们利用细胞色素b基因,对从印度水域采集的、分属于24个种群的149尾双斑歧须鮠个体的遗传结构和系统发育关系进行了研究。数据的综合分析表明,印度双斑歧须鮠由三个不同的线粒体DNA谱系组成,具有星状单倍型网络,表现出高遗传变异和单倍型多样性。分子方差分析表明,观察到的大部分遗传变异存在于种群之间,这表明基因流受到限制。高总体Fst值(0.82367)也证明了基因流的长期中断,而谱系的间断分布可能有利于这种情况。

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