Lee Yunhee, Jeong Hye Im, Jeong Sang Eun, Jeon Che Ok
Department of Life Science, Chung-Ang University, Seoul 06974, Republic of Korea.
Int J Syst Evol Microbiol. 2016 Sep;66(9):3264-3269. doi: 10.1099/ijsem.0.001185. Epub 2016 May 24.
A Gram-staining-negative, strictly aerobic and yellow-pigmented bacterium, designated strain S2-22T, was isolated from estuary sediment in South Korea. Cells of strain S2-22T were oxidase- and catalase-positive rods without gliding motility. Growth was observed at 15-43 °C (optimum, 35-37 °C), at pH 5.5-9.0 (optimum, pH 6.5-7.5) and in the presence of 0.0-10.0 % (w/v) NaCl (optimum, 2.0 %). Phylogenetic analysis based on 16S rRNA gene sequences showed that strain S2-22T formed a tight phyletic lineage with Zeaxanthinibacter enoshimensis TD-ZE3T with a high bootstrap value and their 16S rRNA gene sequence similarity was 94.6 %. The respiratory quinone detected was menaquinone 6 (MK-6) only and iso-C15 : 0, iso-C17 : 0 3-OH, summed feature 3 (comprising C16 : 1ω7c/C16 : 1ω6c) and iso-C15 : 1G were the major fatty acids. Phosphatidylethanolamine was identified as the major polar lipid and five unidentified aminolipids, two unidentified phospholipids and three unidentified lipids were also detected as minor polar lipids. The G+C content of the genomic DNA was 45.5 mol%. Based on the phenotypic, chemotaxonomic and molecular features, strain S2-22T clearly represents a novel species of the genus Zeaxanthinibacter, for which the name Zeaxanthinibacter aestuarii sp. nov. is proposed. The type strain is S2-22T (=KACC 18503T=JCM 31155T). An emended description of the genus Zeaxanthinibacter is also proposed.
从韩国河口沉积物中分离出一株革兰氏染色阴性、严格需氧且产黄色色素的细菌,命名为菌株S2-22T。菌株S2-22T的细胞为氧化酶和过氧化氢酶阳性的杆菌,无滑行运动。在15-43 °C(最适温度为35-37 °C)、pH 5.5-9.0(最适pH为6.5-7.5)以及0.0-10.0 %(w/v)NaCl(最适浓度为2.0 %)的条件下可观察到生长。基于16S rRNA基因序列的系统发育分析表明,菌株S2-22T与江岛玉米黄质杆菌TD-ZE3T形成了一个紧密的系统发育分支,自展值较高,它们的16S rRNA基因序列相似性为94.6 %。检测到的呼吸醌仅为甲基萘醌6(MK-6),主要脂肪酸为异C15 : 0、异C17 : 0 3-OH、特征性总和3(包含C16 : 1ω7c/C16 : 1ω6c)和异C15 : 1G。磷脂酰乙醇胺被鉴定为主要极性脂质,还检测到五种未鉴定的氨基脂质、两种未鉴定的磷脂和三种未鉴定的脂质作为次要极性脂质。基因组DNA的G+C含量为45.5 mol%。基于表型、化学分类学和分子特征,菌株S2-22T显然代表了玉米黄质杆菌属的一个新物种,为此提出了新名称河口玉米黄质杆菌(Zeaxanthinibacter aestuarii sp. nov.)。模式菌株为S2-22T(=KACC 18503T=JCM 31155T)。还提出了对玉米黄质杆菌属的修订描述。