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河口海杆菌的新种,从潮滩中分离得到,并修订了海氏杆菌的描述。

Gramella aestuarii sp. nov., isolated from a tidal flat, and emended description of Gramella echinicola.

机构信息

Department of Life Science & Research Center for Biomolecules and Biosystems, Chung-Ang University, Seoul 156-756, Republic of Korea.

出版信息

Int J Syst Evol Microbiol. 2013 Aug;63(Pt 8):2872-2878. doi: 10.1099/ijs.0.048694-0. Epub 2013 Jan 11.

Abstract

A Gram-staining-negative, yellow-pigmented, strictly aerobic bacterial strain motile by gliding, designated BS12(T), was isolated from a tidal flat at Boseong, Korea. Cells were moderately halotolerant, catalase- and oxidase-positive rods. Growth was observed at 5-40 °C (optimum, 25 °C), at pH 5.5-9.0 (optimum, pH 7.0-7.5) and in the presence of 1-11 % (w/v) NaCl (optimum, 2-4 %). The major cellular fatty acids were iso-C15 : 0, iso-C17 : 0 3-OH, iso-C17 : 1ω9c and anteiso-C15 : 0. The polar lipid pattern comprised phosphatidylethanolamine, four unidentified aminolipids and three unidentified lipids. The G+C content of the genomic DNA was 42.3 mol% and the only respiratory quinone was menaquinone 6. Phylogenetic inference based on 16S rRNA gene sequences showed that strain BS12(T) formed a tight phyletic lineage with members of the genus Gramella. Strain BS12(T) was most closely related to 'Gramella jeungdoensis' HMD3159 with sequence similarity of 97.5 %, but the DNA-DNA relatedness value between the two strains was only 22.1 ± 2.2 %. On the basis of phenotypic and molecular features, strain BS12(T) was shown to represent a novel species of the genus Gramella, for which the name Gramella aestuarii sp. nov. is proposed. The type strain is BS12(T) ( = KACC 16188(T) = JCM 17790(T)). An emended description of Gramella echinicola is also proposed.

摘要

一株革兰氏阴性、黄色着色、严格需氧、可滑行运动的细菌菌株 BS12(T),从韩国保宁市的潮滩中分离得到。细胞中度耐盐,过氧化氢酶和氧化酶阳性,呈棒状。在 5-40°C(最佳温度 25°C)、pH5.5-9.0(最佳 pH7.0-7.5)和 1-11%(w/v)NaCl(最佳 2-4%)存在的条件下可以生长。主要细胞脂肪酸为 iso-C15:0、iso-C17:0 3-OH、iso-C17:1ω9c 和 anteiso-C15:0。极性脂类图谱由磷脂酰乙醇胺、四种未鉴定的胺脂和三种未鉴定的脂类组成。基因组 DNA 的 G+C 含量为 42.3 mol%,唯一的呼吸醌是menaquinone 6。基于 16S rRNA 基因序列的系统发育推断表明,BS12(T) 菌株与 Gramella 属的成员形成了一个紧密的进化谱系。BS12(T) 菌株与 'Gramella jeungdoensis' HMD3159 最为密切相关,序列相似性为 97.5%,但两株菌之间的 DNA-DNA 同源性值仅为 22.1±2.2%。基于表型和分子特征,BS12(T) 菌株被证明代表 Gramella 属的一个新种,因此提议将其命名为 Gramella aestuarii sp. nov.。其模式菌株为 BS12(T)(=KACC 16188(T)=JCM 17790(T))。还提出了对 Gramella echinicola 的修正描述。

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