Li An-Zhang, Lin Long-Zhen, Zhang Ming-Xia, Zhu Hong-Hui
State Key Laboratory of Applied Microbiology Southern China, Guangdong Provincial Key Laboratory of Microbial Culture Collection and Application, Guangdong Microbial Culture Collection Center (GDMCC), Guangdong Institute of Microbiology, Guangzhou 510070, PR China.
Int J Syst Evol Microbiol. 2018 Jan;68(1):254-259. doi: 10.1099/ijsem.0.002489. Epub 2017 Dec 5.
A Gram-stain-negative, strictly aerobic, yellow-pigmented, non-gliding, oval to rod-shaped bacterial strain, designated JB01H24, belonging to the family Flavobacteriaceae, was isolated from marine surface sediment collected from the Ross Sea, Antarctica. Strain JB01H24 grew at 4-40 °C (optimum 25-30 °C), pH 7.0-9.0 (optimum 7.5-8.0), and in the presence of 0-8 % NaCl (optimum 3 %, w/v). Phylogenetic analysis based on 16S rRNA gene sequences showed that strain JB01H24 formed an independent linkage within the family Flavobacteriaceae and was closely related with the genus Gillisia. Strain JB01H24 exhibited 16S rRNA gene sequence similarities of 95.3-91.5 % and 94.9-94.0 % to the type strains of the genera Gillisia and Salinimicrobium, respectively. The major fatty acids (>5 %) were iso-C15 : 0, summed feature 3 (C16 : 1ω6c and/or C16 : 1ω7c), anteiso-C15 : 0, iso-C15 : 1 G and summed feature 9 (iso-C17 : 1ω9c and/or 10-methyl C16 : 0). The major polar lipids were phosphatidylethanolamine, seven unidentified lipids, two unidentified aminolipids and an unidentified aminophospholipid. Strain JB01H24 contained menaquinone-6 as the only ubiquinone. The DNA G+C content was 42.4 mol%. On the basis of phylogenetic, physiological and chemotaxonomic properties, strain JB01H24 is considered to represent a novel species of a new genus within the family Flavobacteriaceae, for which the name Antarcticibacterium flavum gen. nov., sp. nov. is proposed. The type strain of Antarcticibacterium flavum is JB01H24 (=GDMCC 1.1229=KCTC 52984).
从南极罗斯海采集的海洋表层沉积物中分离出一株革兰氏阴性、严格需氧、黄色色素沉着、不滑动、椭圆形至杆状的细菌菌株,命名为JB01H24,属于黄杆菌科。菌株JB01H24在4-40°C(最适温度25-30°C)、pH 7.0-9.0(最适pH 7.5-8.0)以及0-8%(w/v)NaCl存在的条件下生长(最适NaCl浓度为3%)。基于16S rRNA基因序列的系统发育分析表明,菌株JB01H24在黄杆菌科内形成一个独立分支,与吉利氏菌属亲缘关系密切。菌株JB01H24与吉利氏菌属和盐微菌属模式菌株的16S rRNA基因序列相似性分别为95.3-91.5%和94.9-94.0%。主要脂肪酸(>5%)为异-C15:0、特征性总和3(C16:1ω6c和/或C16:1ω7c)、anteiso-C15:0、异-C15:1 G和特征性总和9(异-C17:1ω9c和/或10-甲基-C16:0)。主要极性脂类为磷脂酰乙醇胺、7种未鉴定脂类、2种未鉴定氨基脂类和1种未鉴定氨基磷脂。菌株JB01H24仅含有甲基萘醌-6作为唯一的泛醌。DNA G+C含量为42.4 mol%。基于系统发育、生理和化学分类学特性,菌株JB01H24被认为代表黄杆菌科内一个新属的一个新物种,为此提出新属名“南极杆菌属(Antarcticibacterium)”,新种名“黄色南极杆菌(Antarcticibacterium flavum)”。黄色南极杆菌的模式菌株为JB01H24(=GDMCC 1.1229=KCTC 52984)。