Dolgova Evgeniya V, Potter Ekaterina A, Proskurina Anastasiya S, Minkevich Alexandra M, Chernych Elena R, Ostanin Alexandr A, Efremov Yaroslav R, Bayborodin Sergey I, Nikolin Valeriy P, Popova Nelly A, Kolchanov Nikolay A, Bogachev Sergey S
Institute of Cytology and Genetics, Siberian Branch of the Russian Academy of Sciences, 10 Lavrentieva Ave., Novosibirsk, 630090, Russia.
Institute of Clinical Immunology, Siberian Branch of the Russian Academy of Medical Sciences, 14 Yadrintsevskaya Street, Novosibirsk, 630099, Russia.
Stem Cell Res Ther. 2016 May 25;7(1):76. doi: 10.1186/s13287-016-0338-8.
Previously, we demonstrated that poorly differentiated cells of various origins, including tumor-initiating stem cells present in the ascites form of mouse cancer cell line Krebs-2, are capable of naturally internalizing both linear double-stranded DNA and circular plasmid DNA.
The method of co-incubating Krebs-2 cells with extracellular plasmid DNA (pUC19) or TAMRA-5'-dUTP-labeled polymerase chain reaction (PCR) product was used. It was found that internalized plasmid DNA isolated from Krebs-2 can be transformed into competent Escherichia coli cells. Thus, the internalization processes taking place in the Krebs-2 cell subpopulation have been analyzed and compared, as assayed by E. coli colony formation assay (plasmid DNA) and cytofluorescence (TAMRA-DNA).
We showed that extracellular DNA both in the form of plasmid DNA and a PCR product is internalized by the same subpopulation of Krebs-2 cells. We found that the saturation threshold for Krebs-2 ascites cells is 0.5 μg DNA/10(6) cells. Supercoiled plasmid DNA, human high-molecular weight DNA, and 500 bp PCR fragments are internalized into the Krebs-2 tumor-initiating stem cells via distinct, non-competing internalization pathways. Under our experimental conditions, each cell may harbor 340-2600 copies of intact plasmid material, or up to 3.097 ± 0.044×10(6) plasmid copies (intact or not), as detected by quantitative PCR.
The internalization dynamics of extracellular DNA, copy number of the plasmids taken up by the cells, and competition between different types of double-stranded DNA upon internalization into tumor-initiating stem cells of mouse ascites Krebs-2 have been comprehensively analyzed. Investigation of the extracellular DNA internalization into tumor-initiating stem cells is an important part of understanding their properties and possible destruction mechanisms. For example, a TAMRA-labeled DNA probe may serve as an instrument to develop a target for the therapy of cancer, aiming at elimination of tumor stem cells, as well as developing a straightforward test system for the quantification of poorly differentiated cells, including tumor-initiating stem cells, in the bulk tumor sample (biopsy or surgery specimen).
此前,我们证明了各种来源的低分化细胞,包括存在于小鼠癌细胞系克雷布斯-2腹水形式中的肿瘤起始干细胞,能够自然内化线性双链DNA和环状质粒DNA。
采用将克雷布斯-2细胞与细胞外质粒DNA(pUC19)或TAMRA-5'-dUTP标记的聚合酶链反应(PCR)产物共孵育的方法。发现从克雷布斯-2中分离出的内化质粒DNA可转化为感受态大肠杆菌细胞。因此,通过大肠杆菌集落形成试验(质粒DNA)和细胞荧光分析(TAMRA-DNA),对克雷布斯-2细胞亚群中发生的内化过程进行了分析和比较。
我们表明,质粒DNA形式的细胞外DNA和PCR产物都被克雷布斯-2细胞的同一亚群内化。我们发现克雷布斯-2腹水细胞的饱和阈值为0.5μg DNA/10(6)个细胞。超螺旋质粒DNA、人高分子量DNA和500bp PCR片段通过不同的、非竞争性的内化途径内化到克雷布斯-2肿瘤起始干细胞中。在我们的实验条件下,通过定量PCR检测,每个细胞可能含有340-2600个完整质粒物质拷贝,或多达3.097±0.044×10(6)个质粒拷贝(完整或不完整)。
全面分析了细胞外DNA的内化动力学、细胞摄取的质粒拷贝数以及不同类型双链DNA在小鼠腹水克雷布斯-2肿瘤起始干细胞内化过程中的竞争情况。研究细胞外DNA内化到肿瘤起始干细胞中是理解其特性和可能破坏机制的重要组成部分。例如,TAMRA标记的DNA探针可作为一种工具,用于开发针对癌症治疗的靶点,旨在消除肿瘤干细胞,以及开发一种直接的检测系统,用于定量大块肿瘤样本(活检或手术标本)中包括肿瘤起始干细胞在内的低分化细胞。