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不同猪种中IGF-1R基因的表达谱及其调控区域的多态性

Expression Profiles of IGF-1R Gene and Polymorphisms of its Regulatory Regions in Different Pig Breeds.

作者信息

Cheng Yunyun, Liu Songcai, Zhang Xin, Wu Qingyan, Li Siming, Fu Haoyu, Dong Lijie, Yu Hao, Hao Linlin

机构信息

College of Animal Science, Jilin University, 5333 Xi'an Road, Changchun, Jilin, 130062, China.

Five-Star Animal Health Pharmaceutical Factory of Jilin Province, 5333 Xi'an Road, Changchun, Jilin, 130062, China.

出版信息

Protein J. 2016 Jun;35(3):231-6. doi: 10.1007/s10930-016-9666-x.

Abstract

Insulin like growth factor 1 receptor (IGF-1R) is a candidate gene for growth and carcass traits in regulating animal growth, metabolism and endocrine. It is widely expressed in liver, muscle, bone tissues where the IGF-1R functions as a factor that promotes cell growth. In this study, the protein expression level of IGF-1R gene in liver and muscle tissues of three periods (birth, weaning and adult) of three pig breeds (BamaXiang pigs (BM), Tibetan pigs (TM) and Junmu No.1 pigs (JM)) were tested by western blot. SNPs within the regulatory region of pig IGF-1R gene were detected using direct sequencing and then the genotypes were identified through AS-PCR approach. Results showed expression profiles of IGF-1R gene between liver and muscle tissues were different and significant differences were also found among pig breeds. In the same time, four SNPs were detected in the regulatory region of IGF-1R gene, among which the genotype frequency of three (g.-1468G > C, g.-1192 C > T and g.330,424 C > T) were significantly different among the pig breeds. BM tended to heterozygous (GC/CT) of the anterior two loci, while TM and JM preferred the other two homozygotes respectively. For the g.330,424 C > T, all pig breeds were tended to be the heterozygous. In conclusion, the SNPs with different genotype distribution among the three pig breeds may explain the gene expression difference between the different pig breeds.

摘要

胰岛素样生长因子1受体(IGF-1R)是调节动物生长、代谢和内分泌的生长及胴体性状的候选基因。它在肝脏、肌肉、骨骼组织中广泛表达,在这些组织中IGF-1R作为促进细胞生长的因子发挥作用。在本研究中,采用蛋白质免疫印迹法检测了三个猪品种(巴马香猪(BM)、藏猪(TM)和军牧1号猪(JM))三个时期(出生、断奶和成年)肝脏和肌肉组织中IGF-1R基因的蛋白质表达水平。通过直接测序检测猪IGF-1R基因调控区的单核苷酸多态性(SNP),然后通过等位基因特异性PCR(AS-PCR)方法鉴定基因型。结果表明,IGF-1R基因在肝脏和肌肉组织中的表达谱不同,猪品种间也存在显著差异。同时,在IGF-1R基因调控区检测到4个SNP,其中3个(g.-1468G>C、g.-1192 C>T和g.330424 C>T)的基因型频率在猪品种间存在显著差异。巴马香猪在前两个位点倾向于杂合子(GC/CT),而藏猪和军牧1号猪分别偏好另外两种纯合子。对于g.330424 C>T,所有猪品种都倾向于杂合子。总之,三个猪品种间不同基因型分布的SNP可能解释了不同猪品种间的基因表达差异。

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