Trautwein Kathleen, Will Sabine Eva, Hulsch Reiner, Maschmann Uwe, Wiegmann Katharina, Hensler Michael, Michael Victoria, Ruppersberg Hanna, Wünsch Daniel, Feenders Christoph, Neumann-Schaal Meina, Kaltenhäuser Sabine, Ulbrich Marcus, Schmidt-Hohagen Kerstin, Blasius Bernd, Petersen Jörn, Schomburg Dietmar, Rabus Ralf
General and Molecular Microbiology, Institute for Chemistry and Biology of the Marine Environment (ICBM), Carl von Ossietzky University Oldenburg, Oldenburg, Germany.
Institute for Biochemistry, Biotechnology and Bioinformatics, Technische Universität Carolo-Wilhelmina Braunschweig, Braunschweig, Germany.
Environ Microbiol. 2016 Dec;18(12):4817-4829. doi: 10.1111/1462-2920.13381. Epub 2016 Jul 24.
Plasmid carriage is associated with energetic costs, and thus only those plasmids providing fitness benefits are stably maintained in the host lineage. Marine bacteria of the Roseobacter clade harbor up to 11 extrachromosomal replicons, adding lifestyle-relevant and possibly habitat success-promoting functions to their genomic repertoire. Phaeobacter inhibens DSM 17395 is a nutritionally versatile representative, carrying three stable and functionally distinct plasmids (65, 78, and 262 kb). The present study investigates the physiological and energetic consequences of plasmid carriage in P. inhibens DSM 17395, employing mutants cured from all native plasmids in every possible combination (seven different). Cultivation in process-controlled bioreactors with casamino acids as organic substrate revealed a complex physiological response, suggesting existence of functional interconnections between the replicons. Deletion of the 262 kb plasmid boosted growth rate (>3-fold) and growth efficiency (yields for carbon, O and CO ), which was not observed for the 65 or 78 kb plasmid. Carriage of the 262 kb plasmid was most costly for the wild type, i.e. contributing ∼50% to its energetic (dissimilatory) expenditures. Cost-benefit analysis of plasmid carriage reflects the high value of plasmids for niche specialization of P. inhibens DSM 17395 and most likely also for related Phaeobacter species.
质粒携带与能量消耗相关,因此只有那些能提供适应性益处的质粒才能在宿主谱系中稳定维持。红杆菌属的海洋细菌含有多达11个染色体外复制子,为其基因组库增添了与生活方式相关且可能促进栖息地成功定殖的功能。抑制杆菌DSM 17395是营养多样化的代表,携带三种稳定且功能不同的质粒(65、78和262 kb)。本研究调查了抑制杆菌DSM 17395中质粒携带的生理和能量后果,采用了以每种可能组合(七种不同组合)从所有天然质粒中治愈的突变体。在以酪蛋白氨基酸为有机底物的过程控制生物反应器中培养,揭示了一种复杂的生理反应,表明复制子之间存在功能联系。删除262 kb的质粒提高了生长速率(>3倍)和生长效率(碳、氧和二氧化碳的产量),而65或78 kb的质粒则未观察到这种情况。对于野生型来说,携带262 kb的质粒成本最高,即约占其能量(异化)消耗的50%。质粒携带的成本效益分析反映了质粒对抑制杆菌DSM 17395以及很可能对相关的红杆菌属物种生态位特化的高价值。