Srinivas Sujatha, Berger Martine, Brinkhoff Thorsten, Niggemann Jutta
Institute for Chemistry and Biology of the Marine Environment, University of Oldenburg, Oldenburg, Germany.
Front Microbiol. 2022 Jun 21;13:917969. doi: 10.3389/fmicb.2022.917969. eCollection 2022.
Microbial interactions shape ecosystem diversity and chemistry through production and exchange of organic compounds, but the impact of regulatory mechanisms on production and release of these exometabolites is largely unknown. We studied the extent and nature of impact of two signaling molecules, tropodithietic acid (TDA) and the quorum sensing molecule acyl homoserine lactone (AHL) on the exometabolome of the model bacterium DSM 17395, a member of the ubiquitous marine group. Exometabolomes of the wild type, a TDA and a QS (AHL-regulator) negative mutant were analyzed Fourier-transform ion cyclotron resonance mass spectrometry (FT-ICR-MS). Based on a total of 996 reproducibly detected molecular masses, exometabolomes of the TDA and QS negative mutant were ∼70% dissimilar to each other, and ∼90 and ∼60% dissimilar, respectively, to that of the wild type. Moreover, at any sampled growth phase, 40-60% of masses detected in any individual exometabolome were unique to that strain, while only 10-12% constituted a shared "core exometabolome." Putative annotation revealed exometabolites of ecological relevance such as vitamins, amino acids, auxins, siderophore components and signaling compounds with different occurrence patterns in the exometabolomes of the three strains. Thus, this study demonstrates that signaling molecules, such as AHL and TDA, extensively impact the composition of bacterial exometabolomes with potential consequences for species interactions in microbial communities.
微生物相互作用通过有机化合物的产生和交换塑造生态系统多样性和化学性质,但调控机制对这些胞外代谢产物的产生和释放的影响在很大程度上尚不清楚。我们研究了两种信号分子——溴吡咯菌素(TDA)和群体感应分子酰基高丝氨酸内酯(AHL)对模式细菌DSM 17395(一种普遍存在的海洋菌群的成员)的胞外代谢组的影响程度和性质。通过傅里叶变换离子回旋共振质谱(FT-ICR-MS)分析了野生型、TDA阴性突变体和QS(AHL调控因子)阴性突变体的胞外代谢组。基于总共996个可重复检测到的分子量,TDA阴性突变体和QS阴性突变体的胞外代谢组彼此之间约有70%不同,与野生型的胞外代谢组分别约有90%和60%不同。此外,在任何采样的生长阶段,在任何单个胞外代谢组中检测到的分子量的40%-60%是该菌株特有的,而只有10%-12%构成了共享的“核心胞外代谢组”。推测注释揭示了具有生态相关性的胞外代谢产物,如维生素、氨基酸、生长素、铁载体成分和信号化合物,它们在三种菌株的胞外代谢组中具有不同的出现模式。因此,本研究表明,诸如AHL和TDA等信号分子会广泛影响细菌胞外代谢组的组成,对微生物群落中的物种相互作用可能产生影响。