Semenyuk Pavel I, Orlov Victor N, Sokolova Olga S, Kurochkina Lidia P
Belozersky Research Institute of Physico-Chemical Biology, Lomonosov Moscow State University, 119234 Moscow, Russia
Belozersky Research Institute of Physico-Chemical Biology, Lomonosov Moscow State University, 119234 Moscow, Russia.
Biochem J. 2016 Aug 1;473(15):2383-93. doi: 10.1042/BCJ20160367. Epub 2016 May 31.
Recently, we discovered and studied the first virus-encoded chaperonin of bacteriophage EL Pseudomonas aeruginosa, gene product (gp) 146. In the present study, we performed bioinformatics analysis of currently predicted GroEL-like proteins encoded by phage genomes in comparison with cellular and mitochondrial chaperonins. Putative phage chaperonins share a low similarity and do not form a monophyletic group; nevertheless, they are closer to bacterial chaperonins in the phylogenetic tree. Experimental investigation of putative GroEL-like chaperonin proteins has been continued by physicochemical and functional characterization of gp246 encoded by the genome of Pseudomonas fluorescens bacteriophage OBP. Unlike the more usual double-ring architecture of chaperonins, including the EL gp146, the recombinant gp246 produced by Escherichia coli cells has been purified as a single heptameric ring. It possesses ATPase activity and does not require a co-chaperonin for its function. In vitro experiments demonstrated that gp246 is able to suppress the thermal protein inactivation and aggregation in an ATP-dependent manner, thus indicating chaperonin function. Single-particle electron microscopy analysis revealed the different conformational states of OBP chaperonin, depending on the bound nucleotide.
最近,我们发现并研究了铜绿假单胞菌噬菌体EL的首个病毒编码伴侣蛋白,即基因产物(gp)146。在本研究中,我们对噬菌体基因组目前预测的类GroEL蛋白进行了生物信息学分析,并与细胞和线粒体伴侣蛋白进行了比较。假定的噬菌体伴侣蛋白相似度较低,并未形成一个单系类群;然而,在系统发育树中,它们与细菌伴侣蛋白更为接近。通过对荧光假单胞菌噬菌体OBP基因组编码的gp246进行物理化学和功能表征,继续对假定的类GroEL伴侣蛋白进行实验研究。与包括EL gp146在内的更常见的伴侣蛋白双环结构不同,大肠杆菌细胞产生的重组gp246已被纯化成为一个单七聚体环。它具有ATP酶活性,其功能不需要共伴侣蛋白。体外实验表明,gp246能够以ATP依赖的方式抑制蛋白质的热失活和聚集,从而表明其具有伴侣蛋白功能。单颗粒电子显微镜分析揭示了OBP伴侣蛋白根据结合核苷酸的不同而呈现出不同的构象状态。