肺腺癌肿瘤、癌旁及正常组织中差异表达的微小RNA

Differentially Expressed miRNAs in Tumor, Adjacent, and Normal Tissues of Lung Adenocarcinoma.

作者信息

Tian Fei, Li Rui, Chen Zhenzhu, Shen Yanting, Lu Jiafeng, Xie Xueying, Ge Qinyu

机构信息

Research Center for Learning Science, Southeast University, Nanjing 210096, China.

State Key Lab of Bioelectronics, Southeast University, Nanjing 210096, China.

出版信息

Biomed Res Int. 2016;2016:1428271. doi: 10.1155/2016/1428271. Epub 2016 May 10.

Abstract

Lung cancer is the leading cause of cancer deaths. Non-small-cell lung cancer (NSCLC) is the major type of lung cancer. The aim of this study was to characterize the expression profiles of miRNAs in adenocarcinoma (AC), one major subtype of NSCLC. In this study, the miRNAs were detected in normal, adjacent, and tumor tissues by next-generation sequencing. Then the expression levels of differential miRNAs were quantified by quantitative reverse transcription-polymerase chain reaction (qRT-PCR). In the results, 259, 401, and 389 miRNAs were detected in tumor, adjacent, and normal tissues of pooled AC samples, respectively. In addition, for the first time we have found that miR-21-5p and miR-196a-5p were gradually upregulated from normal to adjacent to tumor tissues; miR-218-5p was gradually downregulated with 2-fold or greater change in AC tissues. These 3 miRNAs were validated by qRT-PCR. Lastly, we predicted target genes of these 3 miRNAs and enriched the potential functions and regulatory pathways. The aberrant miR-21-5p, miR-196a-5p, and miR-218-5p may become biomarkers for diagnosis and prognosis of lung adenocarcinoma. This research may be useful for lung adenocarcinoma diagnosis and the study of pathology in lung cancer.

摘要

肺癌是癌症死亡的主要原因。非小细胞肺癌(NSCLC)是肺癌的主要类型。本研究的目的是描述miRNA在NSCLC的一种主要亚型腺癌(AC)中的表达谱。在本研究中,通过下一代测序在正常组织、癌旁组织和肿瘤组织中检测miRNA。然后通过定量逆转录-聚合酶链反应(qRT-PCR)对差异miRNA的表达水平进行定量。结果显示,在合并的AC样本的肿瘤组织、癌旁组织和正常组织中分别检测到259、401和389个miRNA。此外,我们首次发现miR-21-5p和miR-196a-5p从正常组织到癌旁组织再到肿瘤组织逐渐上调;miR-218-5p在AC组织中逐渐下调,变化倍数达2倍或更高。这3个miRNA通过qRT-PCR得到验证。最后,我们预测了这3个miRNA的靶基因,并富集了潜在的功能和调控途径。异常的miR-21-5p、miR-196a-5p和miR-218-5p可能成为肺腺癌诊断和预后的生物标志物。本研究可能对肺腺癌的诊断及肺癌病理学研究具有重要意义。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f77e/4877460/7546637437ff/BMRI2016-1428271.001.jpg

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