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新型且改进的工具和方法,用于增强微生物中天然产物的生物合成。

New and improved tools and methods for enhanced biosynthesis of natural products in microorganisms.

机构信息

Department of Chemical and Biomolecular Engineering, University of Houston, Houston, TX 77204, USA.

Department of Chemical and Biomolecular Engineering, University of Houston, Houston, TX 77204, USA.

出版信息

Curr Opin Biotechnol. 2016 Dec;42:159-168. doi: 10.1016/j.copbio.2016.05.003. Epub 2016 Jun 7.

Abstract

Engineering efficient biosynthesis of natural products in microorganisms requires optimizing gene expression levels to balance metabolite flux distributions and to minimize accumulation of toxic intermediates. Such metabolic optimization is challenged with identifying the right gene targets, and then determining and achieving appropriate gene expression levels. After decades of having a relatively limited set of gene regulation tools available, metabolic engineers are recently enjoying an ever-growing repertoire of more precise and tunable gene expression platforms. Here we review recent applications of natural and designed transcriptional and translational regulatory machinery for engineering biosynthesis of natural products in microorganisms. Customized trans-acting RNAs (sgRNA, asRNA and sRNA), along with appropriate accessory proteins, are allowing for unparalleled tuning of gene expression. Meanwhile metabolite-responsive transcription factors and riboswitches have been implemented in strain screening and evolution, and in dynamic gene regulation. Further refinements and expansions on these platform technologies will circumvent many long-term obstacles in natural products biosynthesis.

摘要

在微生物中高效合成天然产物需要优化基因表达水平,以平衡代谢物通量分布并最大程度减少有毒中间产物的积累。这种代谢优化面临着确定正确的基因靶标,然后确定并实现适当的基因表达水平的挑战。在有相对有限的基因调控工具可用的几十年后,代谢工程师最近正在享受越来越多的更精确和可调谐的基因表达平台。在这里,我们回顾了天然和设计的转录和翻译调控机制在微生物中天然产物生物合成工程中的最新应用。定制的反式作用 RNA(sgRNA、asRNA 和 sRNA)以及适当的辅助蛋白,正在实现基因表达的无与伦比的调谐。同时,代谢物响应的转录因子和核糖体开关已被用于菌株筛选和进化以及动态基因调控。这些平台技术的进一步改进和扩展将规避天然产物生物合成中的许多长期障碍。

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