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来自绿芽孢杆菌JG-B58的三种不同异常S层蛋白的表征,该菌株呈现出两种叠加的S层蛋白。

Characterization of Three Different Unusual S-Layer Proteins from Viridibacillus arvi JG-B58 That Exhibits Two Super-Imposed S-Layer Proteins.

作者信息

Suhr Matthias, Lederer Franziska L, Günther Tobias J, Raff Johannes, Pollmann Katrin

机构信息

Helmholtz-Zentrum Dresden-Rossendorf, Helmholtz Institute Freiberg for Resource Technology, Freiberg, Germany.

Helmholtz-Zentrum Dresden-Rossendorf, Institute of Resource Ecology, Dresden, Germany.

出版信息

PLoS One. 2016 Jun 10;11(6):e0156785. doi: 10.1371/journal.pone.0156785. eCollection 2016.

Abstract

Genomic analyses of Viridibacillus arvi JG-B58 that was previously isolated from heavy metal contaminated environment identified three different putative surface layer (S-layer) protein genes namely slp1, slp2, and slp3. All three genes are expressed during cultivation. At least two of the V. arvi JG-B58 S-layer proteins were visualized on the surface of living cells via atomic force microscopy (AFM). These S-layer proteins form a double layer with p4 symmetry. The S-layer proteins were isolated from the cells using two different methods. Purified S-layer proteins were recrystallized on SiO2 substrates in order to study the structure of the arrays and self-assembling properties. The primary structure of all examined S-layer proteins lack some features that are typical for Bacillus or Lysinibacillus S-layers. For example, they possess no SLH domains that are usually responsible for the anchoring of the proteins to the cell wall. Further, the pI values are relatively high ranging from 7.84 to 9.25 for the matured proteins. Such features are typical for S-layer proteins of Lactobacillus species although sequence comparisons indicate a close relationship to S-layer proteins of Lysinibacillus and Bacillus strains. In comparison to the numerous descriptions of S-layers, there are only a few studies reporting the concomitant existence of two different S-layer proteins on cell surfaces. Together with the genomic data, this is the first description of a novel type of S-layer proteins showing features of Lactobacillus as well as of Bacillus-type S-layer proteins and the first study of the cell envelope of Viridibacillus arvi.

摘要

先前从重金属污染环境中分离出的绿田芽孢杆菌JG-B58的基因组分析鉴定出三个不同的假定表层(S层)蛋白基因,即slp1、slp2和slp3。在培养过程中,这三个基因均表达。通过原子力显微镜(AFM)在活细胞表面观察到至少两种绿田芽孢杆菌JG-B58的S层蛋白。这些S层蛋白形成具有p4对称性的双层结构。使用两种不同的方法从细胞中分离出S层蛋白。为了研究阵列结构和自组装特性,将纯化的S层蛋白在SiO2底物上重结晶。所有检测的S层蛋白的一级结构缺乏一些芽孢杆菌或赖氨酸芽孢杆菌S层典型的特征。例如,它们没有通常负责将蛋白质锚定到细胞壁的SLH结构域。此外,成熟蛋白的pI值相对较高,范围为7.84至9.25。尽管序列比较表明与赖氨酸芽孢杆菌和芽孢杆菌菌株的S层蛋白关系密切,但这些特征是乳酸杆菌属S层蛋白的典型特征。与众多关于S层的描述相比,只有少数研究报道细胞表面同时存在两种不同的S层蛋白。结合基因组数据,这是首次描述一种新型的S层蛋白,它兼具乳酸杆菌和芽孢杆菌型S层蛋白的特征,也是首次对绿田芽孢杆菌的细胞膜进行研究。

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