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酵母酿酒酵母中的核糖体生物发生。

Ribosome biogenesis in the yeast Saccharomyces cerevisiae.

机构信息

Department of Biological Sciences, Center for Nucleic Acids Science and Technology, Carnegie Mellon University, Pittsburgh, Pennsylvania 15213.

出版信息

Genetics. 2013 Nov;195(3):643-81. doi: 10.1534/genetics.113.153197.

DOI:10.1534/genetics.113.153197
PMID:24190922
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3813855/
Abstract

Ribosomes are highly conserved ribonucleoprotein nanomachines that translate information in the genome to create the proteome in all cells. In yeast these complex particles contain four RNAs (>5400 nucleotides) and 79 different proteins. During the past 25 years, studies in yeast have led the way to understanding how these molecules are assembled into ribosomes in vivo. Assembly begins with transcription of ribosomal RNA in the nucleolus, where the RNA then undergoes complex pathways of folding, coupled with nucleotide modification, removal of spacer sequences, and binding to ribosomal proteins. More than 200 assembly factors and 76 small nucleolar RNAs transiently associate with assembling ribosomes, to enable their accurate and efficient construction. Following export of preribosomes from the nucleus to the cytoplasm, they undergo final stages of maturation before entering the pool of functioning ribosomes. Elaborate mechanisms exist to monitor the formation of correct structural and functional neighborhoods within ribosomes and to destroy preribosomes that fail to assemble properly. Studies of yeast ribosome biogenesis provide useful models for ribosomopathies, diseases in humans that result from failure to properly assemble ribosomes.

摘要

核糖体是高度保守的核糖核蛋白纳米机器,可将基因组中的信息翻译成所有细胞中的蛋白质组。在酵母中,这些复杂的颗粒包含四种 RNA(>5400 个核苷酸)和 79 种不同的蛋白质。在过去的 25 年中,酵母的研究为理解这些分子如何在体内组装成核糖体奠定了基础。组装始于核仁中核糖体 RNA 的转录,然后 RNA 经历复杂的折叠途径,同时进行核苷酸修饰、间隔序列去除和与核糖体蛋白结合。超过 200 种组装因子和 76 种小核仁 RNA 与正在组装的核糖体短暂结合,以实现其准确和高效的构建。前核糖体从细胞核输出到细胞质后,在进入功能核糖体池之前,它们经历最后的成熟阶段。存在复杂的机制来监测核糖体内正确结构和功能邻里的形成,并破坏未能正确组装的前核糖体。酵母核糖体生物发生的研究为核糖体病(ribosomopathies)提供了有用的模型,核糖体病是人类因核糖体组装不正确而导致的疾病。

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本文引用的文献

1
Studies on the assembly characteristics of large subunit ribosomal proteins in S. cerevisae.酿酒酵母大亚基核糖体蛋白的组装特性研究。
PLoS One. 2013 Jul 10;8(7):e68412. doi: 10.1371/journal.pone.0068412. Print 2013.
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Has1 regulates consecutive maturation and processing steps for assembly of 60S ribosomal subunits.Has1 调控 60S 核糖体亚基装配的连续成熟和加工步骤。
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Quality control mechanisms during ribosome maturation.核糖体成熟过程中的质量控制机制。
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Yeast and human RNA helicases involved in ribosome biogenesis: current status and perspectives.参与核糖体生物合成的酵母和人类RNA解旋酶:现状与展望
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Yeast polypeptide exit tunnel ribosomal proteins L17, L35 and L37 are necessary to recruit late-assembling factors required for 27SB pre-rRNA processing.酵母多肽出口隧道核糖体蛋白 L17、L35 和 L37 对于招募 27SB 前 rRNA 加工所需的后期组装因子是必需的。
Nucleic Acids Res. 2013 Feb 1;41(3):1965-83. doi: 10.1093/nar/gks1272. Epub 2012 Dec 24.
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Exome sequencing identifies mutation in CNOT3 and ribosomal genes RPL5 and RPL10 in T-cell acute lymphoblastic leukemia.外显子组测序鉴定出 T 细胞急性淋巴细胞白血病中 CNOT3 基因和核糖体基因 RPL5、RPL10 的突变。
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7
Rlp24 activates the AAA-ATPase Drg1 to initiate cytoplasmic pre-60S maturation.Rlp24 通过激活 AAA-ATPase Drg1 来启动细胞质前 60S 成熟。
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Duplex destabilization by four ribosomal DEAD-box proteins.四种核糖体 DEAD-box 蛋白导致双联体解旋不稳定。
Biochemistry. 2012 Dec 18;51(50):10109-18. doi: 10.1021/bi301172s. Epub 2012 Dec 4.
9
Cryo-EM structures of Arx1 and maturation factors Rei1 and Jjj1 bound to the 60S ribosomal subunit.Arx1 与成熟因子 Rei1 和 Jjj1 结合到 60S 核糖体亚基的冷冻电镜结构。
Nat Struct Mol Biol. 2012 Dec;19(12):1228-33. doi: 10.1038/nsmb.2425. Epub 2012 Nov 11.
10
Structure of the pre-60S ribosomal subunit with nuclear export factor Arx1 bound at the exit tunnel.结合核输出因子 Arx1 的前 60S 核糖体亚基的结构位于出口隧道处。
Nat Struct Mol Biol. 2012 Dec;19(12):1234-41. doi: 10.1038/nsmb.2438. Epub 2012 Nov 11.