• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

米曲霉凝集素晶体结构中的六个独立岩藻糖结合位点。

Six independent fucose-binding sites in the crystal structure of Aspergillus oryzae lectin.

作者信息

Makyio Hisayoshi, Shimabukuro Junpei, Suzuki Tatsuya, Imamura Akihiro, Ishida Hideharu, Kiso Makoto, Ando Hiromune, Kato Ryuichi

机构信息

Structural Biology Research Center, Photon Factory, Institute of Materials Structure Science, High Energy Accelerator Research Organization (KEK), 1-1 Oho, Tsukuba, Ibaraki, 305-0801, Japan.

Department of Applied Bioorganic Chemistry, Gifu University, 1-1 Yanagido, Gifu-shi, Gifu 501-1193, Japan; Institute for Integrated Cell-Material Sciences (WPI-iCeMS), Kyoto University, Yoshida Ushinomiya-cho, Sakyo-ku, Kyoto 606-8501, Japan.

出版信息

Biochem Biophys Res Commun. 2016 Aug 26;477(3):477-82. doi: 10.1016/j.bbrc.2016.06.069. Epub 2016 Jun 16.

DOI:10.1016/j.bbrc.2016.06.069
PMID:27318092
Abstract

The crystal structure of AOL (a fucose-specific lectin of Aspergillus oryzae) has been solved by SAD (single-wavelength anomalous diffraction) and MAD (multi-wavelength anomalous diffraction) phasing of seleno-fucosides. The overall structure is a six-bladed β-propeller similar to that of other fucose-specific lectins. The fucose moieties of the seleno-fucosides are located in six fucose-binding sites. Although the Arg and Glu/Gln residues bound to the fucose moiety are common to all fucose-binding sites, the amino-acid residues involved in fucose binding at each site are not identical. The varying peak heights of the seleniums in the electron density map suggest that each fucose-binding site has a different carbohydrate binding affinity.

摘要

米曲霉岩藻糖特异性凝集素(AOL)的晶体结构已通过硒代岩藻糖苷的单波长异常衍射(SAD)和多波长异常衍射(MAD)相位解析得到。其整体结构是一个六叶β-螺旋桨,与其他岩藻糖特异性凝集素的结构相似。硒代岩藻糖苷的岩藻糖部分位于六个岩藻糖结合位点。虽然与岩藻糖部分结合的精氨酸和谷氨酸/谷氨酰胺残基在所有岩藻糖结合位点都很常见,但每个位点参与岩藻糖结合的氨基酸残基并不相同。电子密度图中硒的峰值高度不同,表明每个岩藻糖结合位点具有不同的碳水化合物结合亲和力。

相似文献

1
Six independent fucose-binding sites in the crystal structure of Aspergillus oryzae lectin.米曲霉凝集素晶体结构中的六个独立岩藻糖结合位点。
Biochem Biophys Res Commun. 2016 Aug 26;477(3):477-82. doi: 10.1016/j.bbrc.2016.06.069. Epub 2016 Jun 16.
2
Synthesis of seleno-fucose compounds and their application to the X-ray structural determination of carbohydrate-lectin complexes using single/multi-wavelength anomalous dispersion phasing.硒代岩藻糖化合物的合成及其在利用单波长/多波长反常散射相位法对碳水化合物-凝集素复合物进行X射线结构测定中的应用。
Bioorg Med Chem. 2017 Feb 1;25(3):1132-1142. doi: 10.1016/j.bmc.2016.12.021. Epub 2016 Dec 19.
3
Crystal structure of fungal lectin: six-bladed beta-propeller fold and novel fucose recognition mode for Aleuria aurantia lectin.真菌凝集素的晶体结构:橙黄网柄牛肝菌凝集素的六叶β-螺旋桨折叠和新型岩藻糖识别模式
J Biol Chem. 2003 Jul 18;278(29):27059-67. doi: 10.1074/jbc.M302642200. Epub 2003 May 5.
4
Crystal structure of fucose-specific lectin from Aleuria aurantia binding ligands at three of its five sugar recognition sites.橙黄网柄牛肝菌岩藻糖特异性凝集素在其五个糖识别位点中的三个位点结合配体的晶体结构。
Biochemistry. 2003 Sep 30;42(38):11093-9. doi: 10.1021/bi034983z.
5
Carbohydrate binding specificity of a fucose-specific lectin from Aspergillus oryzae: a novel probe for core fucose.米曲霉中一种岩藻糖特异性凝集素的碳水化合物结合特异性:一种用于核心岩藻糖的新型探针。
J Biol Chem. 2007 May 25;282(21):15700-8. doi: 10.1074/jbc.M701195200. Epub 2007 Mar 23.
6
Comparative analysis of oligosaccharide specificities of fucose-specific lectins from Aspergillus oryzae and Aleuria aurantia using frontal affinity chromatography.使用前沿亲和色谱法对米曲霉和橙黄网孢盘菌中岩藻糖特异性凝集素的寡糖特异性进行比较分析。
Anal Biochem. 2009 Mar 15;386(2):217-21. doi: 10.1016/j.ab.2008.11.044. Epub 2008 Dec 7.
7
The fucose-binding lectin from Ralstonia solanacearum. A new type of beta-propeller architecture formed by oligomerization and interacting with fucoside, fucosyllactose, and plant xyloglucan.来自青枯雷尔氏菌的岩藻糖结合凝集素。一种由寡聚化形成并与岩藻糖苷、岩藻糖基乳糖和植物木葡聚糖相互作用的新型β-螺旋桨结构。
J Biol Chem. 2005 Jul 29;280(30):27839-49. doi: 10.1074/jbc.M505184200. Epub 2005 May 27.
8
Molecular cloning and overexpression of fleA gene encoding a fucose-specific lectin of Aspergillus oryzae.编码米曲霉岩藻糖特异性凝集素的fleA基因的分子克隆与过表达
Biosci Biotechnol Biochem. 2002 May;66(5):1002-8. doi: 10.1271/bbb.66.1002.
9
Aspergillus oryzae lectin induces anaphylactoid oedema and mast cell activation through its interaction with fucose of mast cell-bound non-specific IgE.米曲霉凝集素通过与结合在肥大细胞上的非特异性 IgE 中的岩藻糖相互作用,诱导过敏样水肿和肥大细胞活化。
Scand J Immunol. 2011 Nov;74(5):445-53. doi: 10.1111/j.1365-3083.2011.02598.x.
10
Mode of molecular recognition of L-fucose by fucose-binding legume lectins.岩藻糖结合豆科凝集素对L-岩藻糖的分子识别模式。
Biochem Biophys Res Commun. 2000 Feb 16;268(2):262-7. doi: 10.1006/bbrc.2000.2110.

引用本文的文献

1
Advances in chaperone-assisted RNA crystallography using synthetic antibodies.使用合成抗体的伴侣蛋白辅助RNA晶体学研究进展。
BBA Adv. 2023 Aug 19;4:100101. doi: 10.1016/j.bbadva.2023.100101. eCollection 2023.
2
Heavy Atom Detergent/Lipid Combined X-ray Crystallography for Elucidating the Structure-Function Relationships of Membrane Proteins.用于阐明膜蛋白结构-功能关系的重原子去污剂/脂质联合X射线晶体学
Membranes (Basel). 2021 Oct 27;11(11):823. doi: 10.3390/membranes11110823.
3
Biochemical and structural studies of target lectin SapL1 from the emerging opportunistic microfungus Scedosporium apiospermum.
新兴机会性病原体枝顶孢属 SapL1 靶标凝集素的生化和结构研究。
Sci Rep. 2021 Aug 9;11(1):16109. doi: 10.1038/s41598-021-95008-4.
4
A novel immunochromatographic strips assay for rapid and simple detection of systemic lupus erythematosus.一种用于快速简便检测系统性红斑狼疮的新型免疫层析条检测法。
Sci Rep. 2020 Aug 25;10(1):14178. doi: 10.1038/s41598-020-71137-0.
5
Molecular Simulations of Carbohydrates with a Fucose-Binding Lectin Suggest Modulation by Surface Residues Outside the Fucose-Binding Pocket.岩藻糖结合凝集素对碳水化合物的分子模拟表明,岩藻糖结合口袋外的表面残基可对其进行调节。
Front Pharmacol. 2017 Jun 21;8:393. doi: 10.3389/fphar.2017.00393. eCollection 2017.