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硒代岩藻糖化合物的合成及其在利用单波长/多波长反常散射相位法对碳水化合物-凝集素复合物进行X射线结构测定中的应用。

Synthesis of seleno-fucose compounds and their application to the X-ray structural determination of carbohydrate-lectin complexes using single/multi-wavelength anomalous dispersion phasing.

作者信息

Shimabukuro Junpei, Makyio Hisayoshi, Suzuki Tatsuya, Nishikawa Yosuke, Kawasaki Masato, Imamura Akihiro, Ishida Hideharu, Ando Hiromune, Kato Ryuichi, Kiso Makoto

机构信息

Department of Applied Bioorganic Chemistry, Gifu University, 1-1 Yanagido, Gifu 501-1193, Japan; Institute for Integrated Cell-Material Sciences (WPI-iCeMS), Kyoto University, Yoshida Ushinomiya-cho, Sakyo-ku, Kyoto 606-8501, Japan.

Structural Biology Research Center, Photon Factory, Institute of Materials Structure Science, High Energy Accelerator Research Organization (KEK), 1-1 Oho, Tsukuba, Ibaraki 305-0801, Japan.

出版信息

Bioorg Med Chem. 2017 Feb 1;25(3):1132-1142. doi: 10.1016/j.bmc.2016.12.021. Epub 2016 Dec 19.

Abstract

Selenium-incorporated fucoses (seleno-fucoses) differing in the position of the seleno-substituent were synthesized and applied to the X-ray structural determination of a carbohydrate-lectin complex using single/multi-wavelength anomalous dispersion (SAD/MAD) phasing. The hydroxyl groups at the C-1, -2, -3 and -4 position of fucose were individually substituted with a methylseleno group via a transacetalization reaction using MeSeCHOBn or by an S2 reaction with TolSe equivalents to afford the corresponding MeSe-fucose. The three-dimensional structures of a fucose-binding lectin complexed with several of these MeSe-fucoses have been determined by SAD/MAD phasing by utilizing the diffraction of selenium in the bound MeSe-fucoses.

摘要

合成了硒取代位置不同的含硒岩藻糖(硒代岩藻糖),并将其应用于通过单波长/多波长反常散射(SAD/MAD)相位法对碳水化合物-凝集素复合物进行X射线结构测定。岩藻糖C-1、-2、-3和-4位的羟基通过使用MeSeCHOBn的转缩醛化反应或与TolSe当量进行S2反应,分别被甲基硒基取代,得到相应的甲基硒代岩藻糖。利用结合的甲基硒代岩藻糖中硒的衍射,通过SAD/MAD相位法确定了与几种这些甲基硒代岩藻糖复合的岩藻糖结合凝集素的三维结构。

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