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蓝狐(Alopex lagopus)多态微卫星标记的分离与鉴定

Isolation and characterization of polymorphic microsatellite markers for blue fox (Alopex lagopus).

作者信息

Li Y M, Guo P C, Lu J Y, Bai C Y, Zhao Z H, Yan S Q

机构信息

College of Animal Science, Jilin University, Changchun, China.

出版信息

Genet Mol Res. 2016 Jun 3;15(2):gmr7990. doi: 10.4238/gmr.15027990.

Abstract

The blue fox, belonging to the family Canidae, is a coat color variant of the native arctic fox (Alopex lagopus). To date, microsatellite loci in blue fox are typically amplified using canine simple sequence repeat primers. In the present study, we constructed an (AC)n enrichment library, and isolated and identified 17 polymorphic microsatellite markers for blue fox. The number of alleles per locus is from two to seven based on 24 examined individuals. The expected and observed heterozygosities were in the range of 0.3112 to 0.8236 and 0.2917 to 0.8750, respectively. The polymorphic information content per locus ranged from 0.2583 to 0.8022. These polymorphic markers can be useful for future population genetic studies of both farmed blue foxes and wild arctic foxes.

摘要

蓝狐属于犬科,是本地北极狐(Alopex lagopus)的一种毛色变种。迄今为止,蓝狐的微卫星位点通常使用犬类简单序列重复引物进行扩增。在本研究中,我们构建了一个(AC)n富集文库,并分离和鉴定了17个蓝狐多态性微卫星标记。基于24个检测个体,每个位点的等位基因数为2至7个。预期杂合度和观察杂合度分别在0.3112至0.8236和0.2917至0.8750范围内。每个位点的多态信息含量在0.2583至0.8022之间。这些多态性标记可用于未来养殖蓝狐和野生北极狐的群体遗传学研究。

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