Hilton Benjamin, Gopal Sathyaraj, Xu Lifang, Mazumder Sharmistha, Musich Phillip R, Cho Bongsup P, Zou Yue
Department of Biomedical Sciences, Quillen College of Medicine, East Tennessee State University, Johnson City, Tennessee, 37614, United States of America.
Department of Biomedical and Pharmaceutical Sciences, College of Pharmacy, University of Rhode Island, Kingston, Rhode Island, 02881, United States of America.
PLoS One. 2016 Jun 21;11(6):e0157784. doi: 10.1371/journal.pone.0157784. eCollection 2016.
XPC-RAD23B (XPC) plays a critical role in human nucleotide excision repair (hNER) as this complex recognizes DNA adducts to initiate NER. To determine the mutagenic potential of structurally different bulky DNA damages, various studies have been conducted to define the correlation of XPC-DNA damage equilibrium binding affinity with NER efficiency. However, little is known about the effects of XPC-DNA damage recognition kinetics on hNER. Although association of XPC is important, our current work shows that the XPC-DNA dissociation rate also plays a pivotal role in achieving NER efficiency. We characterized for the first time the binding of XPC to mono- versus di-AAF-modified sequences by using the real time monitoring surface plasmon resonance technique. Strikingly, the half-life (t1/2 or the retention time of XPC in association with damaged DNA) shares an inverse relationship with NER efficiency. This is particularly true when XPC remained bound to clustered adducts for a much longer period of time as compared to mono-adducts. Our results suggest that XPC dissociation from the damage site could become a rate-limiting step in NER of certain types of DNA adducts, leading to repression of NER.
XPC-RAD23B(XPC)在人类核苷酸切除修复(hNER)中起着关键作用,因为该复合物可识别DNA加合物以启动NER。为了确定结构不同的大体积DNA损伤的诱变潜力,已经进行了各种研究来定义XPC-DNA损伤平衡结合亲和力与NER效率之间的相关性。然而,关于XPC-DNA损伤识别动力学对hNER的影响知之甚少。虽然XPC的结合很重要,但我们目前的研究表明,XPC-DNA解离速率在实现NER效率方面也起着关键作用。我们首次使用实时监测表面等离子体共振技术表征了XPC与单-与双-AAF修饰序列的结合。令人惊讶的是,半衰期(t1/2或XPC与受损DNA结合的保留时间)与NER效率呈反比关系。当XPC与簇状加合物结合的时间比单加合物长得多时,情况尤其如此。我们的结果表明,XPC从损伤位点的解离可能成为某些类型DNA加合物NER中的限速步骤,从而导致NER受到抑制。