• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

生物技术相关酿酒酵母中核糖体DNA、核仁蛋白1与沉默信息调节蛋白复合体之间的关系

Relationships between rDNA, Nop1 and Sir complex in biotechnologically relevant distillery yeasts.

作者信息

Adamczyk Jagoda, Deregowska Anna, Potocki Leszek, Kuna Ewelina, Kaplan Jakub, Pabian Sylwia, Kwiatkowska Aleksandra, Lewinska Anna, Wnuk Maciej

机构信息

Department of Genetics, University of Rzeszow, Rejtana 16C, 35-959, Rzeszow, Poland.

Postgraduate School of Molecular Medicine, Medical University of Warsaw, Warsaw, Poland.

出版信息

Arch Microbiol. 2016 Sep;198(7):715-23. doi: 10.1007/s00203-016-1258-9. Epub 2016 Jun 21.

DOI:10.1007/s00203-016-1258-9
PMID:27329282
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4969353/
Abstract

Distillery yeasts are poorly characterized physiological group among the Saccharomyces sensu stricto complex. As industrial yeasts are under constant environmental stress during fermentation processes and the nucleolus is a stress sensor, in the present study, nucleolus-related parameters were evaluated in 22 commercially available distillery yeast strains. Distillery yeasts were found to be a heterogeneous group with a variable content and length of rDNA and degree of nucleolus fragmentation. The levels of rDNA were negatively correlated with Nop1 (r = -0.59, p = 0.0038). Moreover, the protein levels of Sir transcriptional silencing complex and longevity regulators, namely Sir1, Sir2, Sir3 and Fob1, were studied and negative correlations between Sir2 and Nop1 (r = -0.45, p = 0.0332), and between Sir2 and Fob1 (r = -0.49, p = 0.0211) were revealed. In general, S. paradoxus group of distillery yeasts with higher rDNA pools and Sir2 level than S. bayanus group was found to be more tolerant to fermentation-associated stress stimuli, namely mild cold/heat stresses and KCl treatment. We postulate that rDNA state may be considered as a novel factor that may modulate a biotechnological process.

摘要

在狭义酿酒酵母复合体中,酿酒酵母是生理特征 poorly characterized 的一个群体。由于工业酵母在发酵过程中持续处于环境压力之下,且核仁是一种压力传感器,因此在本研究中,我们评估了 22 种市售酿酒酵母菌株中与核仁相关的参数。结果发现,酿酒酵母是一个异质群体,其核糖体 DNA(rDNA)的含量和长度以及核仁碎片化程度各不相同。rDNA 的水平与 Nop1 呈负相关(r = -0.59,p = 0.0038)。此外,我们还研究了 Sir 转录沉默复合体和寿命调节因子(即 Sir1、Sir2、Sir3 和 Fob1)的蛋白质水平,结果显示 Sir2 与 Nop1 之间(r = -0.45,p = 0.0332)以及 Sir2 与 Fob1 之间(r = -0.49,p = 0.0211)存在负相关。总体而言,与巴氏酵母组相比,rDNA 库和 Sir2 水平较高的酿酒酵母中的奇异酵母组被发现对与发酵相关的应激刺激(即轻度冷/热应激和 KCl 处理)具有更强的耐受性。我们推测,rDNA 状态可能被视为一种可调节生物技术过程的新因素。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/20c1/4969353/53ca10bb450d/203_2016_1258_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/20c1/4969353/e35be6daaba6/203_2016_1258_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/20c1/4969353/7fd82b47e655/203_2016_1258_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/20c1/4969353/53ca10bb450d/203_2016_1258_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/20c1/4969353/e35be6daaba6/203_2016_1258_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/20c1/4969353/7fd82b47e655/203_2016_1258_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/20c1/4969353/53ca10bb450d/203_2016_1258_Fig3_HTML.jpg

相似文献

1
Relationships between rDNA, Nop1 and Sir complex in biotechnologically relevant distillery yeasts.生物技术相关酿酒酵母中核糖体DNA、核仁蛋白1与沉默信息调节蛋白复合体之间的关系
Arch Microbiol. 2016 Sep;198(7):715-23. doi: 10.1007/s00203-016-1258-9. Epub 2016 Jun 21.
2
Replication fork arrest and rDNA silencing are two independent and separable functions of the replication terminator protein Fob1 of Saccharomyces cerevisiae.复制叉停滞和 rDNA 沉默是酿酒酵母复制终止蛋白 Fob1 的两个独立且可分离的功能。
J Biol Chem. 2010 Apr 23;285(17):12612-9. doi: 10.1074/jbc.M109.082388. Epub 2010 Feb 23.
3
Association of the RENT complex with nontranscribed and coding regions of rDNA and a regional requirement for the replication fork block protein Fob1 in rDNA silencing.RENT复合物与核糖体DNA的非转录区和编码区的关联以及核糖体DNA沉默中复制叉阻断蛋白Fob1的区域需求。
Genes Dev. 2003 Sep 1;17(17):2162-76. doi: 10.1101/gad.1108403. Epub 2003 Aug 15.
4
RNA Polymerase I and Fob1 contributions to transcriptional silencing at the yeast rDNA locus.RNA聚合酶I和Fob1对酵母核糖体DNA位点转录沉默的作用。
Nucleic Acids Res. 2016 Jul 27;44(13):6173-84. doi: 10.1093/nar/gkw212. Epub 2016 Apr 8.
5
Spontaneous rDNA copy number variation modulates Sir2 levels and epigenetic gene silencing.自发的核糖体DNA拷贝数变异调节Sir2水平和表观遗传基因沉默。
Genes Dev. 2005 May 15;19(10):1199-210. doi: 10.1101/gad.340205.
6
A genetic screen for ribosomal DNA silencing defects identifies multiple DNA replication and chromatin-modulating factors.一项针对核糖体DNA沉默缺陷的基因筛选鉴定出多个DNA复制和染色质调节因子。
Mol Cell Biol. 1999 Apr;19(4):3184-97. doi: 10.1128/MCB.19.4.3184.
7
Nicotinamide induces Fob1-dependent plasmid integration into chromosome XII in Saccharomyces cerevisiae.烟酰胺诱导酿酒酵母中 Fob1 依赖的质粒整合到染色体 XII 中。
FEMS Yeast Res. 2012 Dec;12(8):949-57. doi: 10.1111/j.1567-1364.2012.00844.x. Epub 2012 Sep 17.
8
SIR2 regulates recombination between different rDNA repeats, but not recombination within individual rRNA genes in yeast.Sir2蛋白调控酵母中不同核糖体DNA重复序列之间的重组,但不调控单个核糖体RNA基因内的重组。
Cell. 2004 May 14;117(4):441-53. doi: 10.1016/s0092-8674(04)00414-3.
9
Direct evidence for SIR2 modulation of chromatin structure in yeast rDNA.酵母核糖体DNA中SIR2对染色质结构调控的直接证据。
EMBO J. 1997 Nov 3;16(21):6495-509. doi: 10.1093/emboj/16.21.6495.
10
Nsi1 plays a significant role in the silencing of ribosomal DNA in Saccharomyces cerevisiae.Nsi1 在酿酒酵母核糖体 DNA 的沉默中发挥重要作用。
Nucleic Acids Res. 2012 Jun;40(11):4892-903. doi: 10.1093/nar/gks188. Epub 2012 Feb 22.

引用本文的文献

1
Aneuploidy in yeast: Segregation error or adaptation mechanism?酵母中的非整倍体:分离错误还是适应机制?
Yeast. 2019 Sep;36(9):525-539. doi: 10.1002/yea.3427. Epub 2019 Aug 1.

本文引用的文献

1
Adaptive response to chronic mild ethanol stress involves ROS, sirtuins and changes in chromosome dosage in wine yeasts.葡萄酒酵母对慢性轻度乙醇胁迫的适应性反应涉及活性氧、沉默调节蛋白和染色体剂量变化。
Oncotarget. 2016 May 24;7(21):29958-76. doi: 10.18632/oncotarget.8673.
2
Shifts in rDNA levels act as a genome buffer promoting chromosome homeostasis.核糖体DNA(rDNA)水平的变化充当促进染色体稳态的基因组缓冲器。
Cell Cycle. 2015;14(21):3475-87. doi: 10.1080/15384101.2015.1093705.
3
The sirtuins: Markers of metabolic health.长寿蛋白:代谢健康的标志物。
Mol Nutr Food Res. 2016 Jan;60(1):79-91. doi: 10.1002/mnfr.201500340. Epub 2015 Dec 7.
4
Genome-wide array-CGH analysis reveals YRF1 gene copy number variation that modulates genetic stability in distillery yeasts.全基因组阵列比较基因组杂交分析揭示了YRF1基因拷贝数变异,该变异调节酿酒酵母中的遗传稳定性。
Oncotarget. 2015 Oct 13;6(31):30650-63. doi: 10.18632/oncotarget.5594.
5
Single-cell analysis of aneuploidy events using yeast whole chromosome painting probes (WCPPs).
J Microbiol Methods. 2015 Apr;111:40-9. doi: 10.1016/j.mimet.2015.01.022. Epub 2015 Jan 30.
6
Sirtuins: guardians of mammalian healthspan.沉默调节蛋白:哺乳动物健康寿命的守护者。
Trends Genet. 2014 Jul;30(7):271-86. doi: 10.1016/j.tig.2014.04.007. Epub 2014 May 28.
7
Links between nucleolar activity, rDNA stability, aneuploidy and chronological aging in the yeast Saccharomyces cerevisiae.核仁活性、rDNA 稳定性、非整倍体与酵母酿酒酵母的老化。
Biogerontology. 2014 Jun;15(3):289-316. doi: 10.1007/s10522-014-9499-y. Epub 2014 Apr 8.
8
Glutamine methylation in histone H2A is an RNA-polymerase-I-dedicated modification.组蛋白 H2A 中的谷氨酰胺甲基化是一种 RNA 聚合酶 I 特异性修饰。
Nature. 2014 Jan 23;505(7484):564-8. doi: 10.1038/nature12819. Epub 2013 Dec 18.
9
Assessment of yeast chromosome XII instability: single chromosome comet assay.酵母染色体 XII 不稳定性评估:单染色体彗星试验。
Fungal Genet Biol. 2014 Feb;63:9-16. doi: 10.1016/j.fgb.2013.12.003. Epub 2013 Dec 12.
10
The nucleolus—guardian of cellular homeostasis and genome integrity.核仁——细胞稳态和基因组完整性的守护者。
Chromosoma. 2013 Dec;122(6):487-97. doi: 10.1007/s00412-013-0430-0.